Detailed information    

insolico Bioinformatically predicted

Overview


Name   comGG/cglG   Type   Machinery gene
Locus tag   M594_RS00920 Genome accession   NZ_CP047883
Coordinates   182717..183130 (+) Length   137 a.a.
NCBI ID   WP_173875729.1    Uniprot ID   A0A6M9F3L0
Organism   Streptococcus mitis strain S022-V3-A4     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 177717..188130
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M594_RS00885 (M594_00905) - 178982..179347 (+) 366 WP_173875725.1 DUF1033 family protein -
  M594_RS00890 (M594_00910) comGA/cglA/cilD 179423..180364 (+) 942 WP_173875726.1 competence type IV pilus ATPase ComGA Machinery gene
  M594_RS00895 (M594_00915) comGB/cglB 180312..181328 (+) 1017 WP_153209728.1 competence type IV pilus assembly protein ComGB Machinery gene
  M594_RS00900 (M594_00920) comGC/cglC 181330..181653 (+) 324 WP_000738641.1 comG operon protein ComGC Machinery gene
  M594_RS00905 (M594_00925) comGD/cglD 181616..181996 (+) 381 WP_173875727.1 competence type IV pilus minor pilin ComGD Machinery gene
  M594_RS00910 (M594_00930) comGE/cglE 182013..182315 (+) 303 WP_153209718.1 competence type IV pilus minor pilin ComGE Machinery gene
  M594_RS00915 (M594_00935) comGF/cglF 182278..182739 (+) 462 WP_173875728.1 competence type IV pilus minor pilin ComGF Machinery gene
  M594_RS00920 (M594_00940) comGG/cglG 182717..183130 (+) 414 WP_173875729.1 competence type IV pilus minor pilin ComGG Machinery gene
  M594_RS00925 (M594_00945) - 183163..183750 (+) 588 WP_173875730.1 class I SAM-dependent methyltransferase -
  M594_RS00930 (M594_00950) comYH 183811..184764 (+) 954 WP_173875731.1 class I SAM-dependent methyltransferase Machinery gene
  M594_RS00935 (M594_00955) - 184814..186004 (+) 1191 WP_084886490.1 acetate kinase -
  M594_RS00940 (M594_00960) rnpA 186154..186525 (+) 372 WP_000739245.1 ribonuclease P protein component -
  M594_RS00945 (M594_00965) - 186500..187324 (+) 825 WP_217423022.1 membrane protein insertase YidC -

Sequence


Protein


Download         Length: 137 a.a.        Molecular weight: 15808.25 Da        Isoelectric Point: 10.3040

>NTDB_id=418230 M594_RS00920 WP_173875729.1 182717..183130(+) (comGG/cglG) [Streptococcus mitis strain S022-V3-A4]
MWKKKKVKAGVLIYAVTMAAIFSLLLQFYLNRQVAHYQDYALNKEKLIAFAMAKRSKDKVEQESGEQAFNLGQVSYQNKK
TSLVTTVRTPKSQYEFLFPSVKIKEEKTDKKEKVATDSSEKAEKKKSEEKSEKKENS

Nucleotide


Download         Length: 414 bp        

>NTDB_id=418230 M594_RS00920 WP_173875729.1 182717..183130(+) (comGG/cglG) [Streptococcus mitis strain S022-V3-A4]
GTGTGGAAAAAGAAAAAAGTTAAGGCGGGTGTTCTCATCTATGCAGTCACTATGGCAGCCATCTTTAGTCTTTTGTTACA
ATTTTACTTGAACCGACAAGTCGCCCACTATCAAGACTATGCTTTAAATAAAGAAAAGTTAATCGCTTTTGCTATGGCTA
AGCGAAGCAAAGATAAGGTTGAGCAAGAAAGTGGGGAACAGGCCTTTAATCTGGGTCAGGTGAGTTATCAAAATAAGAAA
ACAAGCTTGGTGACGACGGTTCGTACGCCTAAGAGTCAATATGAGTTTCTGTTTCCTTCAGTCAAAATCAAAGAAGAGAA
AACAGATAAAAAGGAAAAGGTAGCGACTGATTCAAGCGAAAAAGCGGAGAAGAAAAAATCAGAAGAGAAGTCTGAAAAGA
AAGAGAATTCCTAG

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6M9F3L0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG/cglG Streptococcus mitis SK321

91.241

100

0.912

  comGG/cglG Streptococcus mitis NCTC 12261

92.623

89.051

0.825

  comGG/cglG Streptococcus pneumoniae D39

91.453

85.401

0.781

  comGG/cglG Streptococcus pneumoniae TIGR4

91.453

85.401

0.781

  comGG/cglG Streptococcus pneumoniae R6

91.453

85.401

0.781

  comGG/cglG Streptococcus pneumoniae Rx1

91.453

85.401

0.781

  comYG Streptococcus mutans UA140

39.098

97.08

0.38

  comYG Streptococcus mutans UA159

39.098

97.08

0.38


Multiple sequence alignment