Detailed information NTG0418227

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: M594_RS00905
• Genome accession: NZ_CP047883
• Coordinates: 181616..181996 (+)
• Length: 126 a.a.
• NCBI ID: WP_173875727.1
• Uniprot ID: -
• Organism: Streptococcus mitis strain S022-V3-A4
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 176616..186996

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M594_RS00880 (M594_00900)	nagA	177639..178790 (+)	1152	WP_033687416.1	N-acetylglucosamine-6-phosphate deacetylase	-
M594_RS00885 (M594_00905)	-	178982..179347 (+)	366	WP_173875725.1	DUF1033 family protein	-
M594_RS00890 (M594_00910)	comGA/cglA/cilD	179423..180364 (+)	942	WP_173875726.1	competence type IV pilus ATPase ComGA	Machinery gene
M594_RS00895 (M594_00915)	comGB/cglB	180312..181328 (+)	1017	WP_153209728.1	competence type IV pilus assembly protein ComGB	Machinery gene
M594_RS00900 (M594_00920)	comGC/cglC	181330..181653 (+)	324	WP_000738641.1	comG operon protein ComGC	Machinery gene
M594_RS00905 (M594_00925)	comGD/cglD	181616..181996 (+)	381	WP_173875727.1	competence type IV pilus minor pilin ComGD	Machinery gene
M594_RS00910 (M594_00930)	comGE/cglE	182013..182315 (+)	303	WP_153209718.1	competence type IV pilus minor pilin ComGE	Machinery gene
M594_RS00915 (M594_00935)	comGF/cglF	182278..182739 (+)	462	WP_173875728.1	competence type IV pilus minor pilin ComGF	Machinery gene
M594_RS00920 (M594_00940)	comGG/cglG	182717..183130 (+)	414	WP_173875729.1	competence type IV pilus minor pilin ComGG	Machinery gene
M594_RS00925 (M594_00945)	-	183163..183750 (+)	588	WP_173875730.1	class I SAM-dependent methyltransferase	-
M594_RS00930 (M594_00950)	comYH	183811..184764 (+)	954	WP_173875731.1	class I SAM-dependent methyltransferase	Machinery gene
M594_RS00935 (M594_00955)	-	184814..186004 (+)	1191	WP_084886490.1	acetate kinase	-
M594_RS00940 (M594_00960)	rnpA	186154..186525 (+)	372	WP_000739245.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 126 a.a.
• Molecular weight: 13630.72 Da
• Isoelectric Point: 10.0971

>NTDB_id=418227 M594_RS00905 WP_173875727.1 181616..181996(+) (comGD/cglD) [Streptococcus mitis strain S022-V3-A4]
MLNKIPVKPLQIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEDQIFFMEFEELYRETQKRSVASQQKTSLNLDGQT
ITNGSQKLTVPKGIQAPSGQSITFDRAGGNSSLAKVEFHTSKGAIR

Nucleotide

• Length: 381 bp

>NTDB_id=418227 M594_RS00905 WP_173875727.1 181616..181996(+) (comGD/cglD) [Streptococcus mitis strain S022-V3-A4]
ATGCTAAACAAAATACCAGTCAAACCGTTGCAGATTAAGGCCTTTACCATGCTTGAAAGTCTCTTGGTTTTGGGTCTTGT
GAGTATCCTTGCCTTGGGCTTGTCAGGTTCTGTTCAGTCCACTTTTGCGGCGGTAGAGGATCAGATTTTCTTTATGGAGT
TTGAAGAACTCTATCGGGAAACCCAAAAACGCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACA
ATCACTAACGGCAGTCAAAAGTTGACAGTTCCCAAAGGGATTCAGGCACCATCAGGCCAAAGTATTACATTTGATCGAGC
TGGGGGCAATTCGTCCCTGGCTAAGGTTGAATTTCATACCAGTAAAGGAGCGATTCGTTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	96.825	100	0.968
comGD/cglD	Streptococcus pneumoniae Rx1	95.652	91.27	0.873
comGD/cglD	Streptococcus pneumoniae D39	95.652	91.27	0.873
comGD/cglD	Streptococcus pneumoniae R6	95.652	91.27	0.873
comGD/cglD	Streptococcus mitis SK321	94.783	91.27	0.865
comGD/cglD	Streptococcus pneumoniae TIGR4	94.783	91.27	0.865
comYD	Streptococcus gordonii str. Challis substr. CH1	53.719	96.032	0.516
comYD	Streptococcus mutans UA140	48.649	88.095	0.429
comYD	Streptococcus mutans UA159	48.649	88.095	0.429