Detailed information NTG0404889

Bioinformatically predicted

Overview

• Name: comGC/cglC
• Type: Machinery gene
• Locus tag: GOM48_RS00935
• Genome accession: NZ_CP046523
• Coordinates: 184134..184457 (+)
• Length: 107 a.a.
• NCBI ID: WP_235097796.1
• Uniprot ID: -
• Organism: Streptococcus oralis strain SOD
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 179134..189457

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GOM48_RS00915 (GOM48_00900)	nagA	180500..181651 (+)	1152	WP_084945412.1	N-acetylglucosamine-6-phosphate deacetylase	-
GOM48_RS00920 (GOM48_00905)	-	181800..182165 (+)	366	WP_000286399.1	DUF1033 family protein	-
GOM48_RS00925 (GOM48_00910)	comGA/cglA/cilD	182227..183168 (+)	942	WP_235097792.1	competence type IV pilus ATPase ComGA	Machinery gene
GOM48_RS00930 (GOM48_00915)	comGB/cglB	183116..184132 (+)	1017	WP_235097794.1	competence type IV pilus assembly protein ComGB	Machinery gene
GOM48_RS00935 (GOM48_00920)	comGC/cglC	184134..184457 (+)	324	WP_235097796.1	competence type IV pilus major pilin ComGC	Machinery gene
GOM48_RS00940 (GOM48_00925)	comGD/cglD	184420..184854 (+)	435	WP_235097798.1	competence type IV pilus minor pilin ComGD	Machinery gene
GOM48_RS00945 (GOM48_00930)	comGE/cglE	184817..185119 (+)	303	WP_235097800.1	competence type IV pilus minor pilin ComGE	Machinery gene
GOM48_RS00950 (GOM48_00935)	comGF/cglF	185082..185543 (+)	462	WP_002875275.1	competence type IV pilus minor pilin ComGF	Machinery gene
GOM48_RS00955 (GOM48_00940)	comGG/cglG	185521..185934 (+)	414	WP_235097802.1	competence type IV pilus minor pilin ComGG	Machinery gene
GOM48_RS00960 (GOM48_00945)	-	185967..186557 (+)	591	WP_235097805.1	class I SAM-dependent methyltransferase	-
GOM48_RS00965 (GOM48_00950)	comYH	186616..187569 (+)	954	WP_235097806.1	class I SAM-dependent methyltransferase	Machinery gene
GOM48_RS00970 (GOM48_00955)	-	187619..188809 (+)	1191	WP_235097808.1	acetate kinase	-
GOM48_RS00975 (GOM48_00960)	rnpA	188958..189329 (+)	372	WP_000748124.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 107 a.a.
• Molecular weight: 11817.92 Da
• Isoelectric Point: 10.0527

>NTDB_id=404889 GOM48_RS00935 WP_235097796.1 184134..184457(+) (comGC/cglC) [Streptococcus oralis strain SOD]
MKKLVTNLKKAKVKAFTLVEMLVVLLIISVLLLLFVPNLTKQKDAVDDKGKAAVVKVVESQAELYSLDKNEDASLSKLQA
DGRITAEQAKAYKEYHAKQKTSQTVAD

Nucleotide

• Length: 324 bp

>NTDB_id=404889 GOM48_RS00935 WP_235097796.1 184134..184457(+) (comGC/cglC) [Streptococcus oralis strain SOD]
ATGAAAAAACTCGTGACAAATTTAAAAAAAGCCAAGGTTAAAGCTTTCACTTTGGTAGAAATGTTAGTGGTTTTGCTTAT
CATCAGTGTTCTTCTCTTGCTCTTTGTGCCCAATTTGACCAAGCAAAAGGATGCCGTAGATGACAAAGGAAAAGCTGCTG
TTGTCAAGGTCGTGGAAAGCCAGGCAGAACTCTATAGTTTGGACAAGAATGAAGATGCTAGCCTAAGTAAATTACAGGCG
GATGGTCGCATCACAGCAGAGCAAGCCAAGGCTTATAAAGAATACCATGCAAAACAAAAAACAAGTCAAACTGTTGCGGA
TTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (11-34)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC/cglC	Streptococcus mitis NCTC 12261	93.458	100	0.935
comGC/cglC	Streptococcus mitis SK321	90.909	92.523	0.841
comGC/cglC	Streptococcus pneumoniae Rx1	88.889	92.523	0.822
comGC/cglC	Streptococcus pneumoniae D39	88.889	92.523	0.822
comGC/cglC	Streptococcus pneumoniae R6	88.889	92.523	0.822
comGC/cglC	Streptococcus pneumoniae TIGR4	87.879	92.523	0.813
comYC	Streptococcus gordonii str. Challis substr. CH1	68.627	95.327	0.654
comYC	Streptococcus mutans UA140	69.149	87.85	0.607
comYC	Streptococcus mutans UA159	69.149	87.85	0.607
comYC	Streptococcus suis isolate S10	67.391	85.981	0.579
comGC	Lactococcus lactis subsp. cremoris KW2	55.446	94.393	0.523
comGC	Latilactobacillus sakei subsp. sakei 23K	43.478	85.981	0.374