Detailed information NTG0403203

Bioinformatically predicted

Overview

• Name: comX/comX2
• Type: Regulator
• Locus tag: GL185_RS08760
• Genome accession: NZ_CP046357
• Coordinates: 1746257..1746736 (+)
• Length: 159 a.a.
• NCBI ID: WP_197098057.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 525
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 1741257..1751736

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GL185_RS08735 (GL185_08890)	-	1741996..1742871 (-)	876	WP_001861296.1	RluA family pseudouridine synthase	-
GL185_RS08740 (GL185_08895)	pbp2a	1742958..1745153 (+)	2196	WP_000762624.1	penicillin-binding protein PBP2A	-
GL185_RS08745 (GL185_08900)	rpmG	1745206..1745358 (+)	153	WP_001809375.1	50S ribosomal protein L33	-
GL185_RS08750 (GL185_08905)	secE	1745368..1745544 (+)	177	WP_001210991.1	preprotein translocase subunit SecE	-
GL185_RS08755 (GL185_08910)	nusG	1745599..1746135 (+)	537	WP_000376736.1	transcription termination/antitermination protein NusG	-
GL185_RS08760 (GL185_08915)	comX/comX2	1746257..1746736 (+)	480	WP_197098057.1	sigma-70 family RNA polymerase sigma factor	Regulator

Sequence

Protein

• Length: 159 a.a.
• Molecular weight: 19903.59 Da
• Isoelectric Point: 7.3798

>NTDB_id=403203 GL185_RS08760 WP_197098057.1 1746257..1746736(+) (comX/comX2) [Streptococcus pneumoniae strain 525]
MIKELYEEVQGTVYKCRNEYYLHLWELSDWEQEGMLCLHELISREEGLVDDIPRLRKYFKTKFRNRILDYIRKQESQKRR
YDKELYEEVGEISHRISEGGLWLDDYYLFHETLRDYRNKQSKEKQEELERVLSNERFRGRQRVLRDLRIVFKEFTIRTH

Nucleotide

• Length: 480 bp

>NTDB_id=403203 GL185_RS08760 WP_197098057.1 1746257..1746736(+) (comX/comX2) [Streptococcus pneumoniae strain 525]
ATGATTAAAGAATTGTATGAAGAAGTCCAAGGGACTGTGTATAAGTGTAGAAATGAATATTACCTTCATTTATGGGAATT
GTCGGATTGGGAGCAAGAAGGCATGCTCTGCTTACATGAATTGATTAGTAGAGAAGAAGGACTGGTAGACGATATTCCAC
GTTTAAGGAAATATTTCAAGACCAAGTTTCGAAATCGAATTTTAGACTATATCCGTAAACAGGAAAGTCAGAAGCGTAGA
TACGATAAAGAACTCTATGAAGAAGTGGGTGAGATCAGTCATCGTATAAGTGAGGGGGGTCTCTGGCTAGATGATTATTA
TCTCTTTCATGAAACACTAAGAGATTATAGAAACAAACAAAGTAAAGAGAAACAAGAAGAACTAGAACGCGTCTTAAGCA
ATGAACGATTTCGAGGGCGTCAAAGAGTATTAAGAGACTTACGCATTGTGTTTAAGGAGTTTACTATCCGTACCCATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/comX1	Streptococcus pneumoniae TIGR4	99.371	100	0.994
comX/comX2	Streptococcus pneumoniae TIGR4	99.371	100	0.994
comX/comX2	Streptococcus pneumoniae Rx1	98.742	100	0.987
comX/comX1	Streptococcus pneumoniae Rx1	98.742	100	0.987
comX/comX2	Streptococcus pneumoniae D39	98.742	100	0.987
comX/comX1	Streptococcus pneumoniae D39	98.742	100	0.987
comX/comX2	Streptococcus pneumoniae R6	98.742	100	0.987
comX/comX1	Streptococcus pneumoniae R6	98.742	100	0.987
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	91.195	100	0.912
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	91.195	100	0.912
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	89.937	100	0.899
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	88.608	99.371	0.881
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	48.077	98.113	0.472
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	48.077	98.113	0.472
comX/sigX	Streptococcus mutans UA159	46	94.34	0.434
comX/sigX	Streptococcus suis D9	45.695	94.969	0.434
comX/sigX	Streptococcus suis isolate S10	45.695	94.969	0.434
comX/sigX	Streptococcus suis P1/7	45.695	94.969	0.434
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	39.216	96.226	0.377
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	39.216	96.226	0.377
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	40	94.34	0.377
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	40	94.34	0.377
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	40	94.34	0.377
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	40	94.34	0.377
comX	Streptococcus salivarius SK126	38.926	93.711	0.365
comX	Streptococcus thermophilus LMG 18311	38.926	93.711	0.365
comX	Streptococcus thermophilus LMD-9	38.926	93.711	0.365