Detailed information NTG0402426

Bioinformatically predicted

Overview

• Name: comQ
• Type: Machinery gene
• Locus tag: FOB21_RS17665
• Genome accession: NZ_CP046296
• Coordinates: 1399864..1400478 (-)
• Length: 204 a.a.
• NCBI ID: WP_410487243.1
• Uniprot ID: -
• Organism: Acinetobacter lwoffii strain FDAARGOS_552
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1394864..1405478

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FOB21_RS08045 (FOB21_08045)	-	1397294..1398172 (-)	879	WP_155861571.1	hypothetical protein	-
FOB21_RS08050 (FOB21_08050)	aroB	1398183..1399262 (-)	1080	WP_155861572.1	3-dehydroquinate synthase	-
FOB21_RS08055 (FOB21_08055)	aroK	1399291..1399827 (-)	537	WP_005101380.1	shikimate kinase AroK	-
FOB21_RS17665	comQ	1399864..1400478 (-)	615	WP_410487243.1	hypothetical protein	Machinery gene
FOB21_RS08060 (FOB21_08060)	-	1400533..1401942 (-)	1410	Protein_1366	AMIN domain-containing protein	-
FOB21_RS08065 (FOB21_08065)	pilP	1401960..1402487 (-)	528	WP_155861573.1	pilus assembly protein PilP	Machinery gene
FOB21_RS08070 (FOB21_08070)	comO	1402487..1403209 (-)	723	WP_155861574.1	type 4a pilus biogenesis protein PilO	Machinery gene
FOB21_RS08075 (FOB21_08075)	comN	1403206..1403808 (-)	603	WP_155861575.1	PilN domain-containing protein	Machinery gene
FOB21_RS08080 (FOB21_08080)	-	1403862..1404725 (-)	864	WP_004679438.1	IS982 family transposase	-

Sequence

Protein

• Length: 204 a.a.
• Molecular weight: 21908.74 Da
• Isoelectric Point: 4.4133

>NTDB_id=402426 FOB21_RS17665 WP_410487243.1 1399864..1400478(-) (comQ) [Acinetobacter lwoffii strain FDAARGOS_552]
MWGGDYSPSLDLNVDLGTASAGTFSFGLLKISDYMLDLQLTALQTDGLGEILSAPKIMTGDKQKAHILRGTEIPYQTYSA
EGGTTTSFKEANLRLEVTPSITPDGKVQMELKIEKDSIGTITPEGPSINTNELQTNVLVSDGETVVLGGIFDDLRVKNSS
KVPFLGDLPVLGNLFKNSSSTSSQAELLIFVTPRIVNDSVSRNH

Nucleotide

• Length: 615 bp

>NTDB_id=402426 FOB21_RS17665 WP_410487243.1 1399864..1400478(-) (comQ) [Acinetobacter lwoffii strain FDAARGOS_552]
GTGTGGGGAGGAGACTATTCTCCAAGTCTAGATCTAAATGTGGATTTAGGGACTGCAAGTGCAGGAACATTTAGTTTTGG
ATTGCTAAAAATTTCTGACTATATGTTGGATTTACAGTTAACTGCACTACAAACAGATGGATTGGGTGAGATTTTATCTG
CTCCTAAAATTATGACAGGTGATAAACAAAAAGCTCATATTTTACGCGGAACAGAAATTCCCTATCAAACATATAGTGCA
GAAGGAGGAACAACAACTTCTTTTAAAGAAGCAAACTTGAGACTTGAAGTAACGCCAAGTATTACGCCAGATGGTAAAGT
ACAGATGGAACTCAAGATTGAAAAAGATAGTATCGGTACAATTACGCCTGAAGGTCCTTCCATTAATACCAATGAATTAC
AAACGAATGTATTGGTAAGTGATGGTGAAACAGTGGTATTGGGAGGGATATTTGATGATCTTAGAGTAAAGAATTCCAGT
AAAGTACCATTTTTAGGGGATTTGCCTGTTTTAGGTAATCTTTTTAAAAATAGTTCAAGCACCTCAAGTCAAGCAGAGCT
CCTGATTTTCGTTACACCTCGAATTGTTAATGACAGTGTTTCAAGAAATCATTAA

Domains

Predicted by InterproScan.

• Bacterial type II and III secretion system protein (Secretin) (42-196)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comQ	Acinetobacter baylyi ADP1	58	98.039	0.569
pilQ	Acinetobacter baumannii D1279779	56.784	97.549	0.554
pilQ	Acinetobacter baumannii strain A118	56.784	97.549	0.554
pilQ	Pseudomonas aeruginosa PAK	50	92.157	0.461
pilQ	Vibrio cholerae strain A1552	46.875	94.118	0.441
pilQ	Vibrio cholerae O1 biovar El Tor strain E7946	46.875	94.118	0.441
pilQ	Legionella pneumophila strain ERS1305867	45.178	96.569	0.436
pilQ	Legionella pneumophila strain Lp02	45.178	96.569	0.436
pilQ	Vibrio campbellii strain DS40M4	46.354	94.118	0.436
comE	Glaesserella parasuis strain SC1401	42.021	92.157	0.387
comE	Haemophilus influenzae Rd KW20	40.415	94.608	0.382
comE	Haemophilus influenzae 86-028NP	40.415	94.608	0.382
pilQ	Neisseria meningitidis M1080	38.806	98.529	0.382
pilQ	Neisseria meningitidis MC58	38.806	98.529	0.382
pilQ	Neisseria gonorrhoeae strain FA1090	37.931	99.51	0.377