Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | HTZ78_RS02105 | Genome accession | NZ_CP054306 |
| Coordinates | 434397..435506 (-) | Length | 369 a.a. |
| NCBI ID | WP_212718540.1 | Uniprot ID | - |
| Organism | Synechocystis sp. PCC 7338 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 429397..440506
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTZ78_RS02085 (HTZ78_02085) | - | 429710..431035 (+) | 1326 | WP_212718523.1 | aminopeptidase P N-terminal domain-containing protein | - |
| HTZ78_RS02090 (HTZ78_02090) | - | 431247..431855 (-) | 609 | WP_028948479.1 | ATP-dependent Clp protease proteolytic subunit | - |
| HTZ78_RS02095 (HTZ78_02095) | - | 431981..432658 (-) | 678 | WP_212718531.1 | ATP-dependent Clp protease proteolytic subunit | - |
| HTZ78_RS02100 (HTZ78_02100) | pilC | 433076..434290 (-) | 1215 | WP_212718538.1 | type II secretion system F family protein | Machinery gene |
| HTZ78_RS02105 (HTZ78_02105) | pilT | 434397..435506 (-) | 1110 | WP_212718540.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| HTZ78_RS02110 (HTZ78_02110) | - | 435883..437286 (+) | 1404 | WP_212718542.1 | efflux RND transporter periplasmic adaptor subunit | - |
Sequence
Protein
Download Length: 369 a.a. Molecular weight: 40556.87 Da Isoelectric Point: 6.9682
>NTDB_id=398791 HTZ78_RS02105 WP_212718540.1 434397..435506(-) (pilT) [Synechocystis sp. PCC 7338]
MALEYMIEDLMEQLVEMGGSDMHIQAGAPVYFRVSGKLEPINEEVLTPQESQKLIFSMLNNSQRKELEQSWELDCSYGVK
GLARFRINVYKERGCYAACLRALSSKIPNFEQLGLPNIVREMAERPRGLILVTGQTGSGKTTTLAAILDLINRTRAEHIL
TIEDPIEYVFPNVRSLFHQRQRGEDTKSFSNALRAALREDPDIVLVGELRDLETIALAITAAETGHLVFGTLHTNSAAST
IDRMLDVFPANQQAQIRAMLSNSLLAVFAQNLVKKKAPKPGEFGRALVQEIMVITPAIANLIREGKAAQIYSAIQTGAKL
GMQTMEQGLATLVVSGVISLEEGLAKSGKPDELQRLIGGMAPQPAGKRR
MALEYMIEDLMEQLVEMGGSDMHIQAGAPVYFRVSGKLEPINEEVLTPQESQKLIFSMLNNSQRKELEQSWELDCSYGVK
GLARFRINVYKERGCYAACLRALSSKIPNFEQLGLPNIVREMAERPRGLILVTGQTGSGKTTTLAAILDLINRTRAEHIL
TIEDPIEYVFPNVRSLFHQRQRGEDTKSFSNALRAALREDPDIVLVGELRDLETIALAITAAETGHLVFGTLHTNSAAST
IDRMLDVFPANQQAQIRAMLSNSLLAVFAQNLVKKKAPKPGEFGRALVQEIMVITPAIANLIREGKAAQIYSAIQTGAKL
GMQTMEQGLATLVVSGVISLEEGLAKSGKPDELQRLIGGMAPQPAGKRR
Nucleotide
Download Length: 1110 bp
>NTDB_id=398791 HTZ78_RS02105 WP_212718540.1 434397..435506(-) (pilT) [Synechocystis sp. PCC 7338]
ATGGCATTGGAATACATGATCGAAGATCTGATGGAGCAGTTGGTGGAAATGGGCGGCTCCGATATGCATATTCAAGCAGG
GGCACCAGTTTATTTTCGAGTAAGCGGCAAATTAGAACCCATTAACGAGGAAGTTTTAACTCCCCAAGAAAGCCAAAAGC
TGATCTTTAGCATGCTCAACAATTCCCAACGGAAAGAACTAGAACAAAGTTGGGAATTGGACTGTTCCTATGGGGTGAAG
GGGCTAGCTCGTTTCCGCATTAACGTCTATAAAGAACGGGGTTGTTATGCCGCCTGTTTACGGGCCCTCTCCTCCAAAAT
CCCCAACTTTGAACAATTGGGACTACCCAACATTGTGCGGGAAATGGCAGAACGTCCCAGGGGATTGATTCTGGTCACAG
GACAAACAGGCTCTGGTAAAACCACCACCCTAGCGGCGATTTTAGATTTAATTAACCGCACCAGGGCTGAACATATTCTC
ACCATCGAAGACCCGATTGAGTATGTGTTTCCCAATGTCCGGAGCTTATTTCACCAAAGACAACGGGGCGAAGACACCAA
AAGTTTTAGCAATGCTCTGCGGGCGGCCCTACGGGAGGATCCAGACATTGTACTGGTGGGGGAACTACGGGATTTAGAAA
CCATCGCCCTCGCTATCACGGCGGCGGAAACTGGGCACTTAGTGTTTGGTACTTTACACACCAACTCTGCTGCTAGTACT
ATTGACCGGATGCTGGACGTGTTTCCCGCTAATCAGCAGGCCCAAATCCGTGCCATGCTCTCCAACTCCCTATTGGCGGT
GTTTGCCCAGAATTTGGTTAAGAAAAAAGCCCCTAAACCTGGGGAATTTGGCCGGGCCCTGGTGCAGGAAATTATGGTCA
TTACCCCGGCGATCGCCAACCTGATTCGGGAAGGAAAAGCGGCCCAGATTTATTCCGCCATTCAAACCGGGGCCAAGTTG
GGCATGCAGACCATGGAACAAGGCCTGGCCACATTGGTGGTATCGGGGGTAATTTCCCTAGAAGAAGGTTTGGCTAAGAG
TGGTAAGCCCGACGAACTGCAGCGATTGATCGGTGGCATGGCCCCCCAACCCGCCGGCAAACGTCGTTAA
ATGGCATTGGAATACATGATCGAAGATCTGATGGAGCAGTTGGTGGAAATGGGCGGCTCCGATATGCATATTCAAGCAGG
GGCACCAGTTTATTTTCGAGTAAGCGGCAAATTAGAACCCATTAACGAGGAAGTTTTAACTCCCCAAGAAAGCCAAAAGC
TGATCTTTAGCATGCTCAACAATTCCCAACGGAAAGAACTAGAACAAAGTTGGGAATTGGACTGTTCCTATGGGGTGAAG
GGGCTAGCTCGTTTCCGCATTAACGTCTATAAAGAACGGGGTTGTTATGCCGCCTGTTTACGGGCCCTCTCCTCCAAAAT
CCCCAACTTTGAACAATTGGGACTACCCAACATTGTGCGGGAAATGGCAGAACGTCCCAGGGGATTGATTCTGGTCACAG
GACAAACAGGCTCTGGTAAAACCACCACCCTAGCGGCGATTTTAGATTTAATTAACCGCACCAGGGCTGAACATATTCTC
ACCATCGAAGACCCGATTGAGTATGTGTTTCCCAATGTCCGGAGCTTATTTCACCAAAGACAACGGGGCGAAGACACCAA
AAGTTTTAGCAATGCTCTGCGGGCGGCCCTACGGGAGGATCCAGACATTGTACTGGTGGGGGAACTACGGGATTTAGAAA
CCATCGCCCTCGCTATCACGGCGGCGGAAACTGGGCACTTAGTGTTTGGTACTTTACACACCAACTCTGCTGCTAGTACT
ATTGACCGGATGCTGGACGTGTTTCCCGCTAATCAGCAGGCCCAAATCCGTGCCATGCTCTCCAACTCCCTATTGGCGGT
GTTTGCCCAGAATTTGGTTAAGAAAAAAGCCCCTAAACCTGGGGAATTTGGCCGGGCCCTGGTGCAGGAAATTATGGTCA
TTACCCCGGCGATCGCCAACCTGATTCGGGAAGGAAAAGCGGCCCAGATTTATTCCGCCATTCAAACCGGGGCCAAGTTG
GGCATGCAGACCATGGAACAAGGCCTGGCCACATTGGTGGTATCGGGGGTAATTTCCCTAGAAGAAGGTTTGGCTAAGAG
TGGTAAGCCCGACGAACTGCAGCGATTGATCGGTGGCATGGCCCCCCAACCCGCCGGCAAACGTCGTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Legionella pneumophila strain Lp02 |
54.655 |
90.244 |
0.493 |
| pilT | Legionella pneumophila strain ERS1305867 |
54.655 |
90.244 |
0.493 |
| pilT | Pseudomonas aeruginosa PAK |
51.585 |
94.038 |
0.485 |
| pilT | Acinetobacter baylyi ADP1 |
51.009 |
94.038 |
0.48 |
| pilT | Acinetobacter nosocomialis M2 |
50.72 |
94.038 |
0.477 |
| pilT | Acinetobacter baumannii strain A118 |
50.72 |
94.038 |
0.477 |
| pilT | Acinetobacter baumannii D1279779 |
50.72 |
94.038 |
0.477 |
| pilT | Pseudomonas stutzeri DSM 10701 |
50.432 |
94.038 |
0.474 |
| pilT | Vibrio cholerae strain A1552 |
51.026 |
92.412 |
0.472 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
51.026 |
92.412 |
0.472 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
46.995 |
99.187 |
0.466 |
| pilT | Neisseria meningitidis 8013 |
48.955 |
90.786 |
0.444 |
| pilT | Neisseria gonorrhoeae MS11 |
48.657 |
90.786 |
0.442 |
| pilU | Pseudomonas stutzeri DSM 10701 |
37.892 |
95.122 |
0.36 |