Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   GR130_RS22765 Genome accession   NZ_CP047146
Coordinates   5206114..5207922 (+) Length   602 a.a.
NCBI ID   WP_159506405.1    Uniprot ID   -
Organism   Streptomyces sp. GS7     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 5201114..5212922
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GR130_RS22750 (GR130_22750) - 5201955..5202722 (-) 768 WP_159506402.1 alpha/beta fold hydrolase -
  GR130_RS22755 (GR130_22755) - 5202946..5203980 (-) 1035 WP_159506403.1 GDP-mannose 4,6-dehydratase -
  GR130_RS22760 (GR130_22760) - 5204328..5206136 (+) 1809 WP_159506404.1 ABC transporter ATP-binding protein -
  GR130_RS22765 (GR130_22765) rcrQ 5206114..5207922 (+) 1809 WP_159506405.1 ABC transporter ATP-binding protein Regulator
  GR130_RS22770 (GR130_22770) - 5208253..5208768 (+) 516 WP_159506406.1 hypothetical protein -
  GR130_RS22775 (GR130_22775) - 5208841..5208944 (+) 104 Protein_4559 IS5/IS1182 family transposase -
  GR130_RS22780 (GR130_22780) - 5209101..5210645 (+) 1545 WP_159506407.1 FMN-binding glutamate synthase family protein -
  GR130_RS22785 (GR130_22785) - 5210785..5211591 (+) 807 WP_159506408.1 alpha/beta fold hydrolase -
  GR130_RS22790 (GR130_22790) - 5211784..5211915 (+) 132 Protein_4562 flavoprotein -
  GR130_RS22795 (GR130_22795) - 5211975..5212193 (-) 219 WP_159506409.1 hypothetical protein -
  GR130_RS40870 (GR130_22800) - 5212271..5212495 (+) 225 Protein_4564 short-chain dehydrogenase -

Sequence

Protein


Download         Length: 602 a.a.        Molecular weight: 64978.85 Da        Isoelectric Point: 7.9929

>NTDB_id=357675 GR130_RS22765 WP_159506405.1 5206114..5207922(+) (rcrQ) [Streptomyces sp. GS7]
MVSADSASRARRGPARRTLGLLRPHRAPLTVAVALGIGGVALNATGPMLLGRATDLVFDGLRHTRGSGGVDFDGIARLLL
IALALYGTAALLTLLQGRLVAAVVQRVVFALRRSVEVKLARLPLRYFDRHPAGEVLSRVTNDVDNLQQTLQQSLSQLLTA
AFSVLTMLVLMFVISPLLALIMLVCVPVSAVLAARISKRAQPRFTQQWSATGALNAHIEEVYTGHSLVKGFGRREQAERA
FDEHNQALYRAAARAQFISGSIEPSMMFVSNLGYVVVAVVGALRVLTGTLSIGDVQAFILYSRQFSHPIVEVAGIAARLQ
SALASAERIHDLLDADEQGPDPAHPAHLHEARGHVRFEKVCFRYSPDTPLIEDLSLTVEPGQSVAVVGPTGAGKTTLGNL
LMRFYETDAGRILLDGTDITTMTREELRAHIGLVLQDAWLFSGTIAENIAYGRPDATREDVVAAARATCADRFIRTLPDG
YDTVLDEESATISAGEKQLVTIARAFMTRPSILLLDEATSAVDTRTEALIQRALHSLRAGRTSFVIAHRLSTIRDADLIL
VMEGGRIVERGTHAQLLAAKGAYARLHTALEPDAGLENALPH

Nucleotide


Download         Length: 1809 bp        

>NTDB_id=357675 GR130_RS22765 WP_159506405.1 5206114..5207922(+) (rcrQ) [Streptomyces sp. GS7]
ATGGTCTCGGCGGACAGCGCTAGCCGCGCGCGGCGCGGCCCCGCCCGCCGCACGCTGGGGCTACTGCGCCCGCACCGTGC
CCCGCTGACCGTGGCGGTCGCCCTCGGCATCGGCGGCGTCGCGCTCAACGCGACGGGCCCGATGCTCCTCGGCAGGGCCA
CCGACCTCGTCTTCGACGGCCTCCGGCACACCCGTGGATCCGGCGGAGTCGACTTCGACGGGATCGCCCGCCTGCTGCTG
ATCGCGCTCGCGCTCTACGGCACGGCCGCCCTGCTCACCCTCCTCCAGGGGCGGCTGGTCGCGGCCGTCGTCCAGCGCGT
GGTCTTCGCGCTGCGCCGGTCCGTGGAGGTCAAGCTCGCCCGCCTGCCGCTGCGGTACTTCGACCGCCACCCGGCGGGCG
AGGTGCTCAGCCGGGTGACCAACGACGTCGACAACCTCCAGCAGACCCTGCAGCAGAGCCTCAGTCAGCTGCTCACGGCG
GCGTTCTCCGTGCTGACCATGCTGGTTCTGATGTTCGTCATCTCGCCGCTGCTGGCACTGATCATGCTGGTCTGCGTACC
GGTGTCGGCCGTCCTCGCAGCCCGGATCAGCAAGCGCGCACAGCCGCGGTTCACCCAGCAGTGGTCCGCCACCGGAGCGC
TCAACGCGCACATCGAGGAGGTCTACACCGGGCACTCGCTGGTCAAGGGCTTCGGGCGGCGCGAACAGGCCGAGCGGGCC
TTCGACGAGCACAACCAGGCTCTCTACCGCGCCGCCGCGCGCGCCCAGTTCATCTCCGGCAGCATCGAACCGTCGATGAT
GTTCGTCTCCAACCTCGGCTATGTCGTCGTGGCGGTCGTCGGCGCACTGCGCGTGCTCACCGGGACCCTCTCCATCGGCG
ACGTCCAGGCGTTCATCCTCTACTCCCGGCAGTTCAGCCATCCCATCGTCGAGGTCGCCGGCATCGCCGCCCGCCTCCAG
TCCGCCCTCGCCTCCGCGGAACGGATCCACGACCTCCTGGACGCCGACGAACAGGGCCCCGACCCCGCGCACCCCGCGCA
CCTCCACGAAGCCCGCGGACACGTCCGGTTCGAGAAGGTCTGCTTCCGCTACTCCCCCGACACCCCCCTCATCGAAGACC
TCTCCCTCACCGTCGAACCCGGCCAGTCCGTGGCGGTCGTCGGCCCGACCGGCGCGGGCAAGACCACCCTGGGCAACCTC
CTCATGCGGTTCTACGAGACGGACGCGGGCCGCATCCTCCTGGACGGCACCGACATCACCACCATGACCCGCGAGGAACT
GCGCGCCCACATCGGCCTGGTGCTCCAGGACGCCTGGCTCTTCTCCGGCACCATCGCGGAGAACATCGCCTACGGGCGCC
CCGACGCCACCCGCGAGGACGTCGTGGCCGCCGCCCGCGCCACGTGTGCCGACCGCTTCATCCGCACCCTGCCCGACGGC
TACGACACCGTCCTGGACGAGGAGTCGGCCACCATCAGCGCGGGCGAGAAACAACTCGTCACCATCGCCCGCGCGTTCAT
GACCCGGCCCTCGATCCTGCTCCTGGACGAGGCGACCAGCGCCGTCGACACCCGTACAGAGGCCCTCATCCAGCGCGCCC
TGCACTCGCTGCGCGCGGGACGCACCAGCTTCGTCATCGCCCACCGCCTCTCCACCATCCGCGACGCGGACCTCATCCTC
GTGATGGAGGGCGGCCGCATCGTCGAACGCGGCACCCACGCCCAACTCCTGGCCGCGAAAGGCGCCTACGCCCGACTCCA
CACGGCCCTGGAGCCCGACGCCGGACTGGAGAACGCCCTCCCGCACTGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(30-308)

ABC transporter (ABC_tran)

(372-520)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

42.782

94.352

0.404

Multiple sequence alignment