Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | GR130_RS22895 | Genome accession | NZ_CP047146 |
| Coordinates | 5230469..5231107 (+) | Length | 212 a.a. |
| NCBI ID | WP_159506423.1 | Uniprot ID | - |
| Organism | Streptomyces sp. GS7 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 5225469..5236107
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GR130_RS22870 (GR130_22870) | - | 5226470..5227399 (+) | 930 | WP_159506419.1 | LysR family transcriptional regulator | - |
| GR130_RS22875 (GR130_22875) | - | 5227556..5228161 (-) | 606 | WP_159506420.1 | DJ-1/PfpI family protein | - |
| GR130_RS22880 (GR130_22880) | - | 5228158..5229129 (-) | 972 | WP_159506421.1 | DJ-1/PfpI family protein | - |
| GR130_RS22885 (GR130_22885) | - | 5229474..5230175 (+) | 702 | WP_159506422.1 | hypothetical protein | - |
| GR130_RS22890 (GR130_22890) | - | 5230235..5230357 (+) | 123 | Protein_4583 | epoxide hydrolase | - |
| GR130_RS22895 (GR130_22895) | clpP | 5230469..5231107 (+) | 639 | WP_159506423.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| GR130_RS22900 (GR130_22900) | clpP | 5231109..5231711 (+) | 603 | WP_159506424.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| GR130_RS22905 (GR130_22905) | - | 5231792..5232223 (-) | 432 | WP_159506425.1 | helix-turn-helix transcriptional regulator | - |
| GR130_RS40875 (GR130_22910) | - | 5232431..5232517 (+) | 87 | Protein_4587 | SDR family oxidoreductase | - |
| GR130_RS22915 (GR130_22915) | - | 5232686..5233354 (+) | 669 | WP_159506426.1 | class I SAM-dependent methyltransferase | - |
| GR130_RS22920 (GR130_22920) | - | 5233490..5233846 (-) | 357 | WP_201304972.1 | hypothetical protein | - |
| GR130_RS22925 (GR130_22925) | - | 5234059..5235708 (+) | 1650 | WP_159506427.1 | allantoin permease | - |
Sequence
Protein
Download Length: 212 a.a. Molecular weight: 22911.03 Da Isoelectric Point: 4.8964
>NTDB_id=357676 GR130_RS22895 WP_159506423.1 5230469..5231107(+) (clpP) [Streptomyces sp. GS7]
MTPLTTLPPRAEEGDTPPSRFDDHLAAQLLAQRIVLLGTQVDDVSANRVCAQLLLLSAEDPRTDISLYINSPGGSVSAGL
AIYDTMRLIPNDVSTLAMGFAASMGQFLLTVGAPGKRLALPNARIMMHQPSAGIGGTAADIEIQAENLQFTKKAVERITA
EHTGQSEETIARDGDRDRWFTAEQAREYGIVDRVVESLVDIRPAASRRRMGL
MTPLTTLPPRAEEGDTPPSRFDDHLAAQLLAQRIVLLGTQVDDVSANRVCAQLLLLSAEDPRTDISLYINSPGGSVSAGL
AIYDTMRLIPNDVSTLAMGFAASMGQFLLTVGAPGKRLALPNARIMMHQPSAGIGGTAADIEIQAENLQFTKKAVERITA
EHTGQSEETIARDGDRDRWFTAEQAREYGIVDRVVESLVDIRPAASRRRMGL
Nucleotide
Download Length: 639 bp
>NTDB_id=357676 GR130_RS22895 WP_159506423.1 5230469..5231107(+) (clpP) [Streptomyces sp. GS7]
ATGACTCCACTCACCACGCTCCCGCCCCGCGCGGAGGAGGGCGACACACCGCCCAGCCGCTTCGACGACCATCTCGCGGC
ACAACTGCTCGCCCAGCGGATCGTCCTCCTCGGCACACAGGTCGACGACGTGTCGGCCAACCGGGTGTGCGCGCAGCTGC
TGCTGCTTTCGGCGGAGGACCCGCGCACCGACATCAGCCTGTACATCAACAGCCCCGGCGGGTCGGTCAGCGCGGGTCTC
GCCATCTACGACACCATGCGGCTCATCCCGAACGACGTCTCGACGCTGGCGATGGGGTTCGCCGCCAGTATGGGCCAGTT
CCTGCTCACCGTGGGGGCGCCCGGCAAGCGGTTGGCGCTGCCGAACGCACGGATCATGATGCACCAGCCCTCGGCGGGCA
TCGGTGGCACCGCCGCGGACATCGAAATCCAGGCGGAGAACCTCCAGTTCACCAAGAAGGCCGTCGAGCGGATCACCGCC
GAGCACACCGGGCAGAGCGAGGAGACGATCGCGCGGGACGGCGACCGCGACCGCTGGTTCACGGCCGAGCAGGCCAGGGA
GTACGGGATCGTGGACCGGGTGGTGGAGTCGCTCGTCGACATCCGCCCGGCCGCGTCGCGCCGACGGATGGGGTTGTGA
ATGACTCCACTCACCACGCTCCCGCCCCGCGCGGAGGAGGGCGACACACCGCCCAGCCGCTTCGACGACCATCTCGCGGC
ACAACTGCTCGCCCAGCGGATCGTCCTCCTCGGCACACAGGTCGACGACGTGTCGGCCAACCGGGTGTGCGCGCAGCTGC
TGCTGCTTTCGGCGGAGGACCCGCGCACCGACATCAGCCTGTACATCAACAGCCCCGGCGGGTCGGTCAGCGCGGGTCTC
GCCATCTACGACACCATGCGGCTCATCCCGAACGACGTCTCGACGCTGGCGATGGGGTTCGCCGCCAGTATGGGCCAGTT
CCTGCTCACCGTGGGGGCGCCCGGCAAGCGGTTGGCGCTGCCGAACGCACGGATCATGATGCACCAGCCCTCGGCGGGCA
TCGGTGGCACCGCCGCGGACATCGAAATCCAGGCGGAGAACCTCCAGTTCACCAAGAAGGCCGTCGAGCGGATCACCGCC
GAGCACACCGGGCAGAGCGAGGAGACGATCGCGCGGGACGGCGACCGCGACCGCTGGTTCACGGCCGAGCAGGCCAGGGA
GTACGGGATCGTGGACCGGGTGGTGGAGTCGCTCGTCGACATCCGCCCGGCCGCGTCGCGCCGACGGATGGGGTTGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
47.396 |
90.566 |
0.429 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
50.289 |
81.604 |
0.41 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
44.56 |
91.038 |
0.406 |
| clpP | Streptococcus pneumoniae D39 |
49.133 |
81.604 |
0.401 |
| clpP | Streptococcus pneumoniae R6 |
49.133 |
81.604 |
0.401 |
| clpP | Streptococcus pneumoniae TIGR4 |
49.133 |
81.604 |
0.401 |
| clpP | Streptococcus pneumoniae Rx1 |
49.133 |
81.604 |
0.401 |
| clpP | Streptococcus mutans UA159 |
46.857 |
82.547 |
0.387 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
46.857 |
82.547 |
0.387 |
| clpP | Streptococcus pyogenes JRS4 |
46.857 |
82.547 |
0.387 |
| clpP | Streptococcus pyogenes MGAS315 |
46.857 |
82.547 |
0.387 |
| clpP | Streptococcus thermophilus LMG 18311 |
46.243 |
81.604 |
0.377 |
| clpP | Streptococcus thermophilus LMD-9 |
46.243 |
81.604 |
0.377 |