Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX   Type   Regulator
Locus tag   GO596_RS01500 Genome accession   NZ_CP046628
Coordinates   298889..299365 (-) Length   158 a.a.
NCBI ID   WP_052698789.1    Uniprot ID   -
Organism   Streptococcus equinus strain CNU 77-23     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 293889..304365
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO596_RS01475 (GO596_01475) - 294829..295419 (-) 591 WP_107374771.1 glycoside hydrolase family 73 protein -
  GO596_RS01480 (GO596_01480) - 295416..296189 (-) 774 WP_157339083.1 M15 family metallopeptidase -
  GO596_RS01485 (GO596_01485) - 296173..296877 (-) 705 WP_039697627.1 histidine phosphatase family protein -
  GO596_RS01490 (GO596_01490) - 297075..298412 (-) 1338 WP_024344742.1 PFL family protein -
  GO596_RS01495 (GO596_01495) - 298424..298690 (-) 267 WP_157339084.1 ACT domain-containing protein -
  GO596_RS01500 (GO596_01500) comX/sigX 298889..299365 (-) 477 WP_052698789.1 competence protein ComX Regulator

Sequence

Protein


Download         Length: 158 a.a.        Molecular weight: 19294.14 Da        Isoelectric Point: 8.7333

>NTDB_id=353951 GO596_RS01500 WP_052698789.1 298889..299365(-) (comX/sigX) [Streptococcus equinus strain CNU 77-23]
MDFESYFETVKPIILKLRRHYFVKLWDYDDWIQEGRIVFFKLLQEHPEVLINEGRRYTYFKTKFSNHVKDTIRHQESFKR
KFNRMPYEEIGEISHCVPQLNFLEVADFIAYRDSLSQLKATLSLEEQEKLAKVVRGERFEGKKAFLRQIEPYFSDFKH

Nucleotide


Download         Length: 477 bp        

>NTDB_id=353951 GO596_RS01500 WP_052698789.1 298889..299365(-) (comX/sigX) [Streptococcus equinus strain CNU 77-23]
GTGGATTTTGAAAGCTATTTTGAAACTGTAAAACCAATTATTTTAAAATTAAGACGTCATTACTTTGTGAAATTATGGGA
TTATGACGACTGGATTCAGGAAGGGCGTATTGTCTTTTTCAAACTACTGCAAGAACATCCTGAGGTTCTGATTAATGAGG
GAAGACGCTATACTTACTTCAAGACAAAATTTTCTAATCATGTAAAGGATACCATCCGCCATCAGGAATCCTTTAAACGT
AAATTTAATCGTATGCCTTATGAAGAAATAGGTGAAATTAGTCATTGTGTCCCTCAGCTTAATTTCCTTGAGGTAGCTGA
TTTTATTGCTTACCGAGATAGTTTGTCTCAATTAAAAGCAACTTTAAGCTTAGAAGAGCAAGAAAAGCTAGCAAAAGTAG
TCAGAGGGGAACGATTTGAAGGGAAGAAAGCCTTCTTACGCCAAATTGAACCTTACTTTTCTGACTTTAAGCACTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.