Detailed information    

insolico Bioinformatically predicted

Overview

Name   comX/sigX   Type   Regulator
Locus tag   GO596_RS01220 Genome accession   NZ_CP046628
Coordinates   241595..242071 (-) Length   158 a.a.
NCBI ID   WP_052698789.1    Uniprot ID   -
Organism   Streptococcus equinus strain CNU 77-23     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 236595..247071
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO596_RS01190 (GO596_01190) - 236663..236887 (-) 225 WP_003067534.1 acyl carrier protein -
  GO596_RS01195 (GO596_01195) - 236946..237920 (-) 975 WP_157339076.1 beta-ketoacyl-ACP synthase III -
  GO596_RS01200 (GO596_01200) - 237923..238357 (-) 435 WP_074484027.1 MarR family winged helix-turn-helix transcriptional regulator -
  GO596_RS01205 (GO596_01205) - 238473..239261 (-) 789 WP_074629169.1 enoyl-CoA hydratase -
  GO596_RS01210 (GO596_01210) - 239443..240099 (-) 657 WP_033151962.1 HAD family hydrolase -
  GO596_RS01215 (GO596_01215) - 240200..241558 (+) 1359 WP_157339077.1 aspartate kinase -
  GO596_RS01220 (GO596_01220) comX/sigX 241595..242071 (-) 477 WP_052698789.1 competence protein ComX Regulator

Sequence

Protein


Download         Length: 158 a.a.        Molecular weight: 19294.14 Da        Isoelectric Point: 8.7333

>NTDB_id=353947 GO596_RS01220 WP_052698789.1 241595..242071(-) (comX/sigX) [Streptococcus equinus strain CNU 77-23]
MDFESYFETVKPIILKLRRHYFVKLWDYDDWIQEGRIVFFKLLQEHPEVLINEGRRYTYFKTKFSNHVKDTIRHQESFKR
KFNRMPYEEIGEISHCVPQLNFLEVADFIAYRDSLSQLKATLSLEEQEKLAKVVRGERFEGKKAFLRQIEPYFSDFKH

Nucleotide


Download         Length: 477 bp        

>NTDB_id=353947 GO596_RS01220 WP_052698789.1 241595..242071(-) (comX/sigX) [Streptococcus equinus strain CNU 77-23]
GTGGATTTTGAAAGCTATTTTGAAACTGTAAAACCAATTATTTTAAAATTAAGACGTCATTACTTTGTGAAATTATGGGA
TTATGACGACTGGATTCAGGAAGGGCGTATTGTCTTTTTCAAACTACTGCAAGAACATCCTGAGGTTCTGATTAATGAGG
GAAGACGCTATACTTACTTCAAGACAAAATTTTCTAATCATGTAAAGGATACCATCCGCCATCAGGAATCCTTTAAACGT
AAATTTAATCGTATGCCTTATGAAGAAATAGGTGAAATTAGTCATTGTGTCCCTCAGCTTAATTTCCTTGAGGTAGCTGA
TTTTATTGCTTACCGAGATAGTTTGTCTCAATTAAAAGCAACTTTAAGCTTAGAAGAGCAAGAAAAGCTAGCAAAAGTAG
TCAGAGGGGAACGATTTGAAGGGAAGAAAGCCTTCTTACGCCAAATTGAACCTTACTTTTCTGACTTTAAGCACTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.