Detailed information NTG0351519

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: E3H47_RS12850
• Genome accession: NZ_CP038022
• Coordinates: 2728564..2729622 (-)
• Length: 352 a.a.
• NCBI ID: WP_005024205.1
• Uniprot ID: A0A2T1J1Z2
• Organism: Acinetobacter radioresistens strain DD78
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2723564..2734622

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E3H47_RS15615 (E3H47_12830)	aroK	2723888..2724439 (-)	552	WP_005024215.1	shikimate kinase AroK	-
E3H47_RS12830 (E3H47_12835)	pilQ	2724476..2726656 (-)	2181	WP_005024212.1	type IV pilus secretin PilQ	Machinery gene
E3H47_RS12835 (E3H47_12840)	pilP	2726674..2727201 (-)	528	WP_005018049.1	pilus assembly protein PilP	Machinery gene
E3H47_RS12840 (E3H47_12845)	comO	2727198..2727908 (-)	711	WP_005404626.1	type 4a pilus biogenesis protein PilO	Machinery gene
E3H47_RS12845 (E3H47_12850)	pilN	2727905..2728564 (-)	660	WP_138000910.1	PilN domain-containing protein	Machinery gene
E3H47_RS12850 (E3H47_12855)	comM	2728564..2729622 (-)	1059	WP_005024205.1	pilus assembly protein PilM	Machinery gene
E3H47_RS12855 (E3H47_12860)	ponA	2729784..2732330 (+)	2547	WP_138000911.1	penicillin-binding protein PBP1a	-
E3H47_RS12860 (E3H47_12865)	-	2732377..2733183 (-)	807	WP_005024201.1	putative RNA methyltransferase	-
E3H47_RS12865 (E3H47_12870)	mraY	2733250..2734368 (-)	1119	WP_005018035.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 38898.47 Da
• Isoelectric Point: 4.4198

>NTDB_id=351519 E3H47_RS12850 WP_005024205.1 2728564..2729622(-) (comM) [Acinetobacter radioresistens strain DD78]
MLRLYRKPNKGLVGIDVSSTSVKLLELSVKGGRYWVESYGLYPLSDGSVVEKNILNPEAVADALERVIDIANPQAANAAF
AVPTSAVINKVIEMDADMNDDEREVQIRMDAEQYIPFPLDEVSLDFEVLPDILANPDRVNVLLVATRTENVDARVEVLEM
AGLTAKIADVESYALERAFKVFADTLPIGVNTVGILDIGHTMTTLSVMQHGKIIYTREQVFGGKQLTQDIQNRYGLSYEE
AGRAKKERNLPDDYDIEILEPFLEALVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFAPQVDVQKVEKDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=351519 E3H47_RS12850 WP_005024205.1 2728564..2729622(-) (comM) [Acinetobacter radioresistens strain DD78]
GTGCTCAGGTTATATCGTAAACCAAATAAAGGATTAGTCGGAATAGATGTAAGTTCTACTTCGGTTAAATTGTTAGAGCT
CTCTGTAAAAGGTGGCAGATACTGGGTTGAAAGTTACGGGCTTTATCCGCTTTCCGATGGAAGTGTCGTTGAAAAAAATA
TTCTGAATCCTGAAGCGGTTGCCGATGCTTTAGAGCGCGTAATTGACATTGCTAACCCTCAGGCGGCTAATGCGGCTTTT
GCAGTACCTACTTCGGCGGTGATTAATAAAGTCATCGAGATGGATGCAGACATGAACGATGATGAACGTGAAGTTCAGAT
CCGTATGGATGCAGAGCAATATATTCCTTTTCCTTTAGACGAAGTCAGTCTTGATTTTGAAGTGTTGCCAGATATATTGG
CAAATCCTGATCGAGTAAATGTACTGCTGGTGGCCACCCGTACTGAAAATGTAGATGCACGTGTCGAAGTGCTGGAAATG
GCCGGTCTAACTGCGAAAATTGCTGATGTAGAAAGTTATGCGCTAGAACGTGCGTTTAAAGTGTTCGCTGATACATTGCC
TATAGGGGTGAATACTGTAGGTATTCTAGATATTGGCCACACCATGACAACTTTGTCTGTCATGCAGCATGGCAAGATTA
TCTATACTCGCGAGCAGGTTTTTGGTGGAAAGCAGCTGACTCAGGACATTCAGAATCGTTATGGCCTTTCCTATGAAGAA
GCTGGCCGGGCCAAAAAAGAGCGTAATTTGCCAGATGATTATGATATTGAAATACTCGAGCCTTTCTTAGAGGCCTTAGT
GCAACAGGCTGCTCGTTCTTTGCAGTTTTTTTTCTCGTCTTCACAGTTTAATGAGATTGATCATATTTTATTGGCAGGTG
GAAATGCCAACATACCGGGACTGGCCAAACTACTCCAACAAAAGCTGGGCTACCGGGTAACAATTGCCAATCCATTTTTA
CAGATGGGTTTTGCGCCGCAGGTTGATGTACAAAAAGTTGAAAAAGATGCATCTTCACTCATGGTGGCTTGTGGTTTGGC
GCTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: A0A2T1J1Z2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	84.375	100	0.844
pilM	Acinetobacter baumannii D1279779	84.375	100	0.844
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	41.808	100	0.42