Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | E3H47_RS12835 | Genome accession | NZ_CP038022 |
| Coordinates | 2726674..2727201 (-) | Length | 175 a.a. |
| NCBI ID | WP_005018049.1 | Uniprot ID | A0A062BZX0 |
| Organism | Acinetobacter radioresistens strain DD78 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2721674..2732201
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3H47_RS12815 (E3H47_12820) | - | 2721913..2722776 (-) | 864 | WP_005024218.1 | hypothetical protein | - |
| E3H47_RS12820 (E3H47_12825) | aroB | 2722784..2723869 (-) | 1086 | WP_138000909.1 | 3-dehydroquinate synthase | - |
| E3H47_RS15615 (E3H47_12830) | aroK | 2723888..2724439 (-) | 552 | WP_005024215.1 | shikimate kinase AroK | - |
| E3H47_RS12830 (E3H47_12835) | pilQ | 2724476..2726656 (-) | 2181 | WP_005024212.1 | type IV pilus secretin PilQ | Machinery gene |
| E3H47_RS12835 (E3H47_12840) | pilP | 2726674..2727201 (-) | 528 | WP_005018049.1 | pilus assembly protein PilP | Machinery gene |
| E3H47_RS12840 (E3H47_12845) | comO | 2727198..2727908 (-) | 711 | WP_005404626.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| E3H47_RS12845 (E3H47_12850) | pilN | 2727905..2728564 (-) | 660 | WP_138000910.1 | PilN domain-containing protein | Machinery gene |
| E3H47_RS12850 (E3H47_12855) | comM | 2728564..2729622 (-) | 1059 | WP_005024205.1 | pilus assembly protein PilM | Machinery gene |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19435.61 Da Isoelectric Point: 7.7737
>NTDB_id=351516 E3H47_RS12835 WP_005018049.1 2726674..2727201(-) (pilP) [Acinetobacter radioresistens strain DD78]
MTWNKIILGLCCGMILVGCDSRIDAVNEEMAVIRNQPPLPIEPAPVFSPVPTFAYAAHQFRSPFLPSSLAAELKVMAGKR
VYPNFSRQPQPLESYALESLNMKGSMRNSRGQIIALIQTPDGQIEQVQRGNYMGMHHGRIVQITPTQIDLVEIIPDGREG
YVERPRSLVLIGPQP
MTWNKIILGLCCGMILVGCDSRIDAVNEEMAVIRNQPPLPIEPAPVFSPVPTFAYAAHQFRSPFLPSSLAAELKVMAGKR
VYPNFSRQPQPLESYALESLNMKGSMRNSRGQIIALIQTPDGQIEQVQRGNYMGMHHGRIVQITPTQIDLVEIIPDGREG
YVERPRSLVLIGPQP
Nucleotide
Download Length: 528 bp
>NTDB_id=351516 E3H47_RS12835 WP_005018049.1 2726674..2727201(-) (pilP) [Acinetobacter radioresistens strain DD78]
ATGACTTGGAATAAGATCATTTTAGGCCTGTGCTGCGGCATGATTCTGGTAGGCTGTGATTCACGTATAGATGCAGTAAA
TGAAGAGATGGCAGTCATTCGTAACCAACCACCTCTACCGATTGAACCGGCACCTGTGTTCAGTCCTGTACCTACATTTG
CTTATGCAGCACATCAGTTCAGAAGTCCATTTTTACCTAGCTCGCTTGCAGCTGAGTTAAAAGTTATGGCCGGGAAGCGG
GTTTATCCGAATTTTTCACGCCAACCCCAACCTCTTGAGAGCTATGCCCTTGAATCTTTAAATATGAAAGGCAGTATGCG
TAATTCAAGAGGGCAGATTATTGCACTAATCCAGACGCCCGATGGCCAGATTGAACAAGTGCAGCGCGGGAACTATATGG
GTATGCATCATGGGCGTATTGTTCAGATTACACCTACCCAGATTGATCTGGTTGAGATCATCCCGGATGGGCGCGAAGGC
TATGTGGAACGTCCCCGCAGTCTAGTACTGATTGGGCCACAGCCTTAA
ATGACTTGGAATAAGATCATTTTAGGCCTGTGCTGCGGCATGATTCTGGTAGGCTGTGATTCACGTATAGATGCAGTAAA
TGAAGAGATGGCAGTCATTCGTAACCAACCACCTCTACCGATTGAACCGGCACCTGTGTTCAGTCCTGTACCTACATTTG
CTTATGCAGCACATCAGTTCAGAAGTCCATTTTTACCTAGCTCGCTTGCAGCTGAGTTAAAAGTTATGGCCGGGAAGCGG
GTTTATCCGAATTTTTCACGCCAACCCCAACCTCTTGAGAGCTATGCCCTTGAATCTTTAAATATGAAAGGCAGTATGCG
TAATTCAAGAGGGCAGATTATTGCACTAATCCAGACGCCCGATGGCCAGATTGAACAAGTGCAGCGCGGGAACTATATGG
GTATGCATCATGGGCGTATTGTTCAGATTACACCTACCCAGATTGATCTGGTTGAGATCATCCCGGATGGGCGCGAAGGC
TATGTGGAACGTCCCCGCAGTCTAGTACTGATTGGGCCACAGCCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
78.857 |
100 |
0.789 |
| comL | Acinetobacter baylyi ADP1 |
72.832 |
98.857 |
0.72 |