Detailed information NTG0339425

Bioinformatically predicted

Overview

• Name: pilA/pilA1
• Type: Machinery gene
• Locus tag: ERL55_RS12455
• Genome accession: NZ_CP035376
• Coordinates: 2700575..2701006 (+)
• Length: 143 a.a.
• NCBI ID: WP_129136697.1
• Uniprot ID: -
• Organism: Luteimonas sp. YGD11-2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2695575..2706006

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ERL55_RS12435	pilR	2696911..2698392 (+)	1482	WP_129136693.1	sigma-54 dependent transcriptional regulator	Regulator
ERL55_RS12440	-	2698462..2698746 (+)	285	WP_129136694.1	helix-turn-helix transcriptional regulator	-
ERL55_RS12445	-	2698743..2700029 (+)	1287	WP_129136695.1	HipA domain-containing protein	-
ERL55_RS12450	-	2700032..2700304 (+)	273	WP_129136696.1	hypothetical protein	-
ERL55_RS12455	pilA/pilA1	2700575..2701006 (+)	432	WP_129136697.1	pilin	Machinery gene
ERL55_RS12460	pilB	2701323..2703044 (+)	1722	WP_129136698.1	type IV-A pilus assembly ATPase PilB	Machinery gene
ERL55_RS12465	pilC	2703236..2704507 (+)	1272	WP_129136699.1	type II secretion system F family protein	Machinery gene
ERL55_RS12470	pilD	2704545..2705411 (+)	867	WP_129136700.1	A24 family peptidase	Machinery gene
ERL55_RS12475	-	2705465..2705809 (-)	345	WP_129136701.1	hypothetical protein	-

Sequence

Protein

• Length: 143 a.a.
• Molecular weight: 14584.82 Da
• Isoelectric Point: 4.9718

>NTDB_id=339425 ERL55_RS12455 WP_129136697.1 2700575..2701006(+) (pilA/pilA1) [Luteimonas sp. YGD11-2]
MKKMQKGFTLIELMIVVAIIAILAAIALPAYQDYVARAQASEALTATAGVRADLGVELAENDAFPAAGSPIHAATLLLDG
KYFAPGGAVLGGGNGVITVTFNDGALDTQAMTITPNLSATGDQIASWTCAGLTKPNHIPSGCR

Nucleotide

• Length: 432 bp

>NTDB_id=339425 ERL55_RS12455 WP_129136697.1 2700575..2701006(+) (pilA/pilA1) [Luteimonas sp. YGD11-2]
ATGAAGAAGATGCAGAAGGGCTTCACGCTGATCGAACTGATGATCGTCGTCGCGATCATCGCCATCCTGGCCGCCATCGC
GCTGCCGGCTTACCAGGACTACGTGGCTCGTGCGCAGGCGAGCGAAGCACTGACCGCTACGGCTGGCGTGCGTGCTGACT
TGGGCGTTGAACTTGCAGAGAATGACGCGTTTCCTGCTGCTGGTAGTCCGATTCACGCCGCCACCTTGCTCCTTGATGGC
AAGTACTTCGCCCCGGGCGGAGCGGTTCTGGGCGGGGGCAATGGCGTCATCACTGTTACGTTTAATGATGGTGCGCTCGA
CACCCAAGCTATGACCATTACGCCGAACCTGTCCGCCACTGGTGACCAGATCGCAAGCTGGACCTGTGCAGGCCTGACTA
AGCCGAACCATATCCCGTCCGGCTGCCGCTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (3-28)

• Pilin (bacterial filament) (Pilin) (36-143)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA/pilA1	Eikenella corrodens VA1	51.634	100	0.552
pilA2	Legionella pneumophila str. Paris	44.138	100	0.448
pilA2	Legionella pneumophila strain ERS1305867	44.138	100	0.448
pilA	Ralstonia pseudosolanacearum GMI1000	41.429	97.902	0.406
pilA/pilAI	Pseudomonas stutzeri DSM 10701	40.278	100	0.406
pilA	Pseudomonas aeruginosa PAK	35.802	100	0.406
pilA	Acinetobacter nosocomialis M2	46.281	84.615	0.392
pilA/pilAII	Pseudomonas stutzeri DSM 10701	36.424	100	0.385
pilE	Neisseria gonorrhoeae MS11	33.742	100	0.385
comP	Acinetobacter baylyi ADP1	36.735	100	0.378
pilA	Acinetobacter baumannii strain A118	36.486	100	0.378
pilA	Vibrio parahaemolyticus RIMD 2210633	35.374	100	0.364