Detailed information
Bioinformatically predicted
Overview
| Name | pilA/pilAI | Type | Machinery gene |
| Locus tag | NX81_RS17475 | Genome accession | NZ_CP034649 |
| Coordinates | 3745081..3745488 (-) | Length | 135 a.a. |
| NCBI ID | WP_039433041.1 | Uniprot ID | - |
| Organism | Xanthomonas vasicola strain NCPPB 1060 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3740081..3750488
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NX81_RS17460 (NX81_017460) | pilR | 3741152..3742606 (+) | 1455 | WP_039446302.1 | sigma-54 dependent transcriptional regulator | Regulator |
| NX81_RS17470 (NX81_017470) | pilB | 3743219..3744952 (-) | 1734 | WP_039432925.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| NX81_RS17475 (NX81_017475) | pilA/pilAI | 3745081..3745488 (-) | 408 | WP_039433041.1 | pilin | Machinery gene |
| NX81_RS17480 (NX81_017480) | pilC | 3745840..3747093 (+) | 1254 | WP_039433039.1 | type II secretion system F family protein | Machinery gene |
| NX81_RS17485 (NX81_017485) | - | 3747100..3747963 (+) | 864 | WP_039446301.1 | A24 family peptidase | - |
| NX81_RS17490 (NX81_017490) | coaE | 3747977..3748618 (+) | 642 | WP_039432920.1 | dephospho-CoA kinase | - |
| NX81_RS17495 (NX81_017495) | - | 3748937..3749920 (-) | 984 | WP_053013007.1 | IS5 family transposase | - |
Sequence
Protein
Download Length: 135 a.a. Molecular weight: 13958.02 Da Isoelectric Point: 8.4717
>NTDB_id=332114 NX81_RS17475 WP_039433041.1 3745081..3745488(-) (pilA/pilAI) [Xanthomonas vasicola strain NCPPB 1060]
MKKQQGFTLIELMIVVAIIAILAAIALPAYQDYVVKSQAASALAEITPGKVGFEQATNEGKTPSTAAADAGYIGVGGTTS
YCTVTVTATTIVCATRGGNATKFNGKNLTWTRDAATGLWACSSDLDAKYKPGKCT
MKKQQGFTLIELMIVVAIIAILAAIALPAYQDYVVKSQAASALAEITPGKVGFEQATNEGKTPSTAAADAGYIGVGGTTS
YCTVTVTATTIVCATRGGNATKFNGKNLTWTRDAATGLWACSSDLDAKYKPGKCT
Nucleotide
Download Length: 408 bp
>NTDB_id=332114 NX81_RS17475 WP_039433041.1 3745081..3745488(-) (pilA/pilAI) [Xanthomonas vasicola strain NCPPB 1060]
ATGAAGAAGCAGCAGGGTTTTACGCTGATCGAACTGATGATCGTTGTTGCGATCATTGCTATTCTGGCCGCCATCGCGCT
GCCGGCCTATCAGGATTACGTCGTCAAGTCGCAGGCCGCCTCGGCACTGGCTGAAATCACCCCAGGAAAGGTTGGTTTCG
AGCAGGCAACTAATGAAGGCAAGACTCCAAGTACTGCTGCTGCTGATGCGGGCTACATTGGTGTCGGTGGAACTACTTCG
TACTGCACGGTCACCGTAACTGCGACCACCATCGTTTGCGCGACTCGTGGCGGAAATGCGACGAAGTTTAACGGCAAGAA
CCTCACCTGGACGCGTGACGCCGCCACCGGTCTCTGGGCCTGCAGCTCTGATCTGGACGCAAAGTACAAGCCCGGCAAGT
GCACCTAA
ATGAAGAAGCAGCAGGGTTTTACGCTGATCGAACTGATGATCGTTGTTGCGATCATTGCTATTCTGGCCGCCATCGCGCT
GCCGGCCTATCAGGATTACGTCGTCAAGTCGCAGGCCGCCTCGGCACTGGCTGAAATCACCCCAGGAAAGGTTGGTTTCG
AGCAGGCAACTAATGAAGGCAAGACTCCAAGTACTGCTGCTGCTGATGCGGGCTACATTGGTGTCGGTGGAACTACTTCG
TACTGCACGGTCACCGTAACTGCGACCACCATCGTTTGCGCGACTCGTGGCGGAAATGCGACGAAGTTTAACGGCAAGAA
CCTCACCTGGACGCGTGACGCCGCCACCGGTCTCTGGGCCTGCAGCTCTGATCTGGACGCAAAGTACAAGCCCGGCAAGT
GCACCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
67.407 |
100 |
0.674 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
62.406 |
98.519 |
0.615 |
| pilA | Pseudomonas aeruginosa PAK |
44.667 |
100 |
0.496 |
| pilA | Acinetobacter baumannii strain A118 |
44.755 |
100 |
0.474 |
| comP | Acinetobacter baylyi ADP1 |
40.136 |
100 |
0.437 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
43.939 |
97.778 |
0.43 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
36.076 |
100 |
0.422 |
| pilA | Vibrio cholerae strain A1552 |
38.732 |
100 |
0.407 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
38.732 |
100 |
0.407 |
| pilA | Vibrio cholerae C6706 |
38.732 |
100 |
0.407 |
| pilA2 | Legionella pneumophila str. Paris |
37.956 |
100 |
0.385 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
37.956 |
100 |
0.385 |