Detailed information NTG0328007

Bioinformatically predicted

Overview

• Name: sbcE
• Type: Machinery gene
• Locus tag: FGF55_RS05140
• Genome accession: NZ_CP041691
• Coordinates: 995224..998106 (+)
• Length: 960 a.a.
• NCBI ID: WP_014417326.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain ZJU1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 990224..1003106

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGF55_RS05115 (FGF55_05115)	-	990662..991429 (+)	768	WP_007409232.1	enoyl-CoA hydratase	-
FGF55_RS05120 (FGF55_05120)	-	991454..991639 (-)	186	WP_015239502.1	YhzD family protein	-
FGF55_RS05125 (FGF55_05125)	-	991745..992641 (+)	897	WP_007409231.1	ABC transporter ATP-binding protein	-
FGF55_RS05130 (FGF55_05130)	-	992634..993893 (+)	1260	WP_014417324.1	ABC transporter permease	-
FGF55_RS05135 (FGF55_05135)	-	994004..995227 (+)	1224	WP_014417325.1	DNA repair exonuclease	-
FGF55_RS05140 (FGF55_05140)	sbcE	995224..998106 (+)	2883	WP_014417326.1	AAA family ATPase	Machinery gene
FGF55_RS05145 (FGF55_05145)	yhaM	998180..999124 (+)	945	WP_014417327.1	3'-5' exoribonuclease YhaM	-
FGF55_RS05150 (FGF55_05150)	-	999239..999466 (+)	228	WP_012117207.1	sporulation YhaL family protein	-
FGF55_RS05155 (FGF55_05155)	-	999505..1000356 (-)	852	WP_014417328.1	peptidylprolyl isomerase	-
FGF55_RS05160 (FGF55_05160)	yhzE1	1000515..1000601 (+)	87	WP_017417375.1	sporulation protein YhzE1	-
FGF55_RS05165 (FGF55_05165)	yhzE2	1000726..1000812 (+)	87	WP_003155248.1	sporulation protein YhzE2	-
FGF55_RS05170 (FGF55_05170)	-	1000869..1001087 (-)	219	WP_003155245.1	hypothetical protein	-
FGF55_RS05175 (FGF55_05175)	-	1001148..1001678 (-)	531	WP_007409225.1	DUF3267 domain-containing protein	-
FGF55_RS05185 (FGF55_05185)	-	1001889..1002230 (+)	342	WP_003155243.1	YhaI family protein	-
FGF55_RS05190 (FGF55_05190)	-	1002227..1002838 (-)	612	WP_014417329.1	HTH-type transcriptional regulator Hpr	-

Sequence

Protein

• Length: 960 a.a.
• Molecular weight: 109696.81 Da
• Isoelectric Point: 7.4855

>NTDB_id=328007 FGF55_RS05140 WP_014417326.1 995224..998106(+) (sbcE) [Bacillus amyloliquefaciens strain ZJU1]
MKITAMHIYQYGKFSDRSFQLSDSSVQVIYGLNEAGKTTLMSFIKSVLFGFPKSKKYEPKNGGVYGGTVELKHVDHGAVK
IERTKGAAEKVRVYTASGEIKDGEWLKQLLSDTDRALYEAIYSFDVFGLQEIQAFNRDKIGEFLLYSSLFGSEAAAKLDG
RLAKELDRMYKPNGRNPRLNQELDTLKRLSAQLKQAEAAEAGYHSLLEEKKSAGGRLQDAEARLKDITEEIKTVKSAIEA
KPLADKKTALESELSSYPEALKQFPKDGMHQLEKYESHLHPKAARLEGLRAKADELRRQAELLAPNEDLLQKERQLQELS
GEQHMYESRGEQLAAIQSQIRQTSARVSSGLQQLGRHEEDGILSLNTDYEYEWRLQEAVQSAGQARERKAQLDAMFEQAR
LELEEAERKHAVTAENILDPAVRKEKEAALQLYKQTADTEGNEWQAHVQHLEKQRAKQKKLFLGAGILFIAIFAMLKEWL
PAALFTGALLLYMLSGMQKPLPSERGGPGHKKKKPAISKEAADLLQEELWRDGRHRQQLIADQAVLEQKEAAYERVIRQY
EEWEAEMAPSEKQAELFMKELGFSGSPSHLLDAYHVMKDVKKEILNKHELTIEAGRLQKLQRAFEDRVKKLSPSDGRELS
VKERLHVLLAQAERAREEAKRKQALETDLLHAQEQMRELNEEVHYYEQQVKLLFMAAGAKNREHFCELARLNESRRETER
QLREIKTHLSGIGGKQLEPYMSRTVSELEHTVVQKETEKKTLEEKSAQLREQTALLTVKQEQLESSGLVSDLKQQTEMQK
ERVKKTAKEWAALQTVRHIIREKMERHKKVTLPRLLETAGALYGPLTDGRYHKLYFSEADDSIMVMRKDGTVFSAGELSQ
AACEQLYAAIRFALASERESAVSLPFLLDDSFVHFDRQRLQRLFDVLNQLSEGGRQILYFTCHEHVSRSFHSGQVMRLLS

Nucleotide

• Length: 2883 bp

>NTDB_id=328007 FGF55_RS05140 WP_014417326.1 995224..998106(+) (sbcE) [Bacillus amyloliquefaciens strain ZJU1]
ATGAAAATAACGGCGATGCATATTTACCAATACGGAAAATTTTCCGACCGAAGTTTTCAGCTGTCAGATTCTTCCGTGCA
AGTGATCTACGGGTTAAATGAAGCGGGGAAAACGACATTGATGTCCTTTATCAAAAGCGTGCTGTTCGGTTTTCCGAAAT
CAAAAAAATACGAACCGAAAAATGGCGGGGTTTACGGCGGCACTGTGGAATTGAAGCATGTCGATCACGGTGCTGTCAAA
ATCGAACGGACAAAAGGCGCTGCCGAAAAAGTCAGAGTGTATACGGCTTCAGGCGAAATCAAGGACGGAGAATGGCTCAA
ACAGCTTCTTTCCGATACAGATCGGGCGCTGTACGAAGCGATCTATTCGTTCGATGTATTCGGACTGCAGGAGATTCAAG
CTTTTAACCGGGACAAAATCGGCGAGTTTCTCCTGTATTCGAGCTTATTCGGGTCGGAAGCGGCGGCAAAGCTTGACGGG
CGGCTGGCAAAAGAACTTGACAGGATGTATAAGCCGAACGGGCGGAACCCCCGCTTAAATCAGGAGTTGGATACATTAAA
GCGGCTCAGCGCCCAGCTGAAACAGGCGGAAGCTGCGGAAGCGGGCTATCACAGCCTTCTGGAAGAGAAAAAAAGCGCCG
GCGGCCGTTTGCAGGATGCCGAAGCACGATTGAAAGACATAACTGAAGAAATCAAAACAGTAAAATCAGCGATAGAAGCA
AAGCCGCTCGCAGACAAAAAAACAGCCTTGGAAAGCGAACTTTCTTCTTATCCGGAAGCATTGAAGCAATTCCCGAAGGA
CGGAATGCATCAGCTTGAAAAATACGAATCGCATCTCCATCCGAAAGCGGCCCGTCTTGAGGGGCTTCGGGCAAAAGCGG
ATGAACTCCGGCGGCAGGCTGAGCTGCTCGCTCCAAATGAGGACTTGCTGCAAAAAGAGCGGCAGCTGCAGGAGCTTTCC
GGCGAGCAGCATATGTACGAATCGCGCGGCGAACAGCTTGCCGCCATCCAATCACAGATCCGGCAGACATCTGCCCGCGT
TTCGTCAGGATTGCAGCAGCTCGGAAGACATGAGGAAGACGGCATTCTTTCACTGAACACCGATTATGAATATGAATGGC
GGCTGCAGGAAGCCGTGCAGAGCGCCGGACAGGCAAGAGAAAGAAAGGCACAGCTTGATGCGATGTTCGAACAAGCGCGG
CTGGAGCTGGAAGAAGCCGAACGAAAACATGCCGTGACGGCGGAAAACATTTTGGACCCCGCTGTCAGGAAAGAAAAAGA
AGCCGCTTTACAATTATATAAGCAAACGGCTGATACAGAAGGAAACGAATGGCAGGCACATGTTCAGCATCTGGAAAAAC
AGCGCGCCAAACAAAAAAAGCTCTTTCTCGGTGCGGGCATTCTGTTCATTGCGATTTTCGCTATGTTAAAAGAATGGCTG
CCCGCCGCCCTTTTTACCGGCGCTCTGCTGCTGTATATGCTGTCCGGCATGCAAAAGCCGCTGCCGTCAGAAAGAGGAGG
GCCCGGACACAAGAAAAAGAAGCCGGCGATCTCTAAAGAAGCGGCTGATCTTCTGCAGGAAGAGCTTTGGCGTGACGGCC
GGCACCGGCAGCAGCTGATTGCGGATCAAGCCGTGCTTGAACAGAAAGAAGCGGCATATGAAAGAGTCATCCGCCAATAT
GAAGAATGGGAGGCGGAAATGGCGCCGTCTGAAAAACAGGCGGAACTTTTTATGAAGGAACTGGGGTTTTCAGGAAGTCC
TTCCCATCTTCTTGACGCATATCATGTGATGAAAGATGTCAAAAAAGAAATCCTTAACAAGCATGAGCTGACCATTGAAG
CGGGCCGGCTGCAAAAGCTGCAAAGAGCATTTGAGGACCGGGTCAAAAAGCTGAGTCCTTCAGACGGAAGGGAGCTGTCC
GTAAAAGAAAGACTGCACGTTTTGCTGGCGCAGGCGGAACGGGCCCGTGAGGAAGCAAAACGAAAACAGGCGCTCGAAAC
GGATCTGCTGCATGCACAAGAGCAAATGCGTGAATTAAACGAAGAAGTTCATTACTACGAACAGCAGGTCAAACTGCTTT
TCATGGCGGCAGGCGCAAAAAACCGCGAACACTTTTGTGAACTCGCCAGGCTGAATGAAAGCCGCCGGGAAACAGAGCGG
CAGCTGCGCGAAATCAAAACGCACTTGTCCGGCATAGGCGGAAAACAGCTGGAGCCGTACATGAGCCGCACAGTGTCCGA
ACTTGAACATACAGTCGTTCAGAAGGAAACAGAGAAAAAAACGCTTGAGGAAAAAAGCGCCCAGCTCCGTGAGCAAACCG
CTTTATTAACGGTGAAGCAAGAGCAGCTGGAGTCCTCGGGGCTTGTATCCGATTTAAAACAGCAGACAGAAATGCAGAAG
GAGCGCGTGAAAAAAACCGCTAAAGAGTGGGCCGCATTACAGACGGTCAGACACATTATCAGGGAAAAAATGGAGCGGCA
TAAAAAAGTGACGCTTCCCCGTCTGTTAGAAACCGCCGGTGCATTATACGGACCGCTTACGGACGGACGCTATCACAAAT
TGTATTTTTCCGAAGCTGATGATTCCATTATGGTCATGCGGAAAGACGGAACGGTGTTTTCTGCAGGCGAACTGTCACAG
GCGGCATGCGAGCAGCTTTATGCGGCGATTCGTTTTGCCCTTGCGTCAGAGAGGGAGTCTGCGGTATCACTGCCGTTTTT
ACTTGATGACAGTTTTGTCCATTTTGACAGGCAGCGGCTGCAGCGGCTGTTTGATGTGCTGAATCAGCTTTCAGAAGGCG
GGCGGCAGATACTTTATTTCACCTGCCATGAGCATGTCAGCCGGTCTTTTCACAGCGGACAAGTCATGCGGCTCCTGTCA
TAA

Domains

Predicted by InterProScan.

• AAA domain (AAA_27) (1-199)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sbcE	Bacillus subtilis subsp. subtilis str. 168	56.95	100	0.572