Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | PCC8801_RS07840 | Genome accession | NC_011726 |
| Coordinates | 1687504..1688616 (+) | Length | 370 a.a. |
| NCBI ID | WP_041229755.1 | Uniprot ID | - |
| Organism | Rippkaea orientalis PCC 8801 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1682504..1693616
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PCC8801_RS07830 (PCC8801_1609) | ald | 1683801..1684892 (-) | 1092 | WP_012594934.1 | alanine dehydrogenase | - |
| PCC8801_RS07835 (PCC8801_1610) | pilB/pilB1 | 1685453..1687474 (+) | 2022 | WP_012594935.1 | GspE/PulE family protein | Machinery gene |
| PCC8801_RS07840 (PCC8801_1611) | pilT | 1687504..1688616 (+) | 1113 | WP_041229755.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| PCC8801_RS07845 (PCC8801_1612) | - | 1688717..1689931 (+) | 1215 | WP_012594937.1 | type II secretion system F family protein | - |
| PCC8801_RS07850 (PCC8801_1613) | - | 1689939..1690511 (+) | 573 | WP_012594938.1 | hypothetical protein | - |
| PCC8801_RS07855 (PCC8801_1614) | - | 1690590..1691549 (+) | 960 | WP_012594939.1 | DUF362 domain-containing protein | - |
Sequence
Protein
Download Length: 370 a.a. Molecular weight: 40508.89 Da Isoelectric Point: 7.3266
>NTDB_id=32115 PCC8801_RS07840 WP_041229755.1 1687504..1688616(+) (pilT) [Rippkaea orientalis PCC 8801]
MDLMIEDLMEQLVEMGGSDMHIQAGAPIYFRISGKLAPISEEPLSPQDSQKLIFSMLNNSQRKELEQNWELDCSYGVKGL
ARFRVNVYKERGCYAACLRALSSKIPNFEQLGLPTIIREMAERPRGMVLVTGQTGSGKTTTLAAILDLINRTRGEHILTV
EDPIEYVFPNIKSLFHQRQKGEDTKSFANALRASLREDPDIILVGEMRDLETISLAITAAETGHLVFGTLHTNSAAGTID
RIIDVFPANQQAQIRAMLSNSLLAVFSQCLVKKKSPKPGEFGRAMAQEIMVITPAIANLIREGKASQIYSAIQTGMKLGM
QTMEQALTNLVVSGVVSFEEAIAKSGKPDELQRLIAGAGMGNAAKAKARL
MDLMIEDLMEQLVEMGGSDMHIQAGAPIYFRISGKLAPISEEPLSPQDSQKLIFSMLNNSQRKELEQNWELDCSYGVKGL
ARFRVNVYKERGCYAACLRALSSKIPNFEQLGLPTIIREMAERPRGMVLVTGQTGSGKTTTLAAILDLINRTRGEHILTV
EDPIEYVFPNIKSLFHQRQKGEDTKSFANALRASLREDPDIILVGEMRDLETISLAITAAETGHLVFGTLHTNSAAGTID
RIIDVFPANQQAQIRAMLSNSLLAVFSQCLVKKKSPKPGEFGRAMAQEIMVITPAIANLIREGKASQIYSAIQTGMKLGM
QTMEQALTNLVVSGVVSFEEAIAKSGKPDELQRLIAGAGMGNAAKAKARL
Nucleotide
Download Length: 1113 bp
>NTDB_id=32115 PCC8801_RS07840 WP_041229755.1 1687504..1688616(+) (pilT) [Rippkaea orientalis PCC 8801]
ATGGATTTAATGATCGAAGACTTGATGGAACAGTTGGTCGAAATGGGGGGCTCGGATATGCACATCCAAGCGGGAGCCCC
CATCTATTTCCGCATCAGTGGTAAACTTGCTCCCATTTCAGAAGAACCCCTGTCTCCCCAAGACAGCCAAAAACTGATTT
TTAGTATGCTCAATAACTCCCAACGCAAAGAGTTAGAGCAAAACTGGGAATTAGACTGTTCCTATGGGGTCAAAGGGTTA
GCGCGGTTTCGGGTGAATGTTTATAAAGAAAGGGGCTGTTATGCGGCTTGTTTACGCGCCCTGTCTTCTAAAATTCCCAA
TTTTGAACAGTTAGGACTACCAACGATTATTCGAGAAATGGCCGAACGTCCTAGAGGGATGGTTCTGGTAACAGGACAAA
CGGGATCAGGAAAAACGACCACCCTTGCAGCGATTTTAGATTTAATTAATCGCACCCGTGGAGAGCATATTCTAACGGTG
GAAGATCCCATTGAATACGTTTTTCCTAATATTAAAAGCCTGTTTCATCAACGCCAAAAAGGAGAAGATACCAAATCCTT
TGCCAACGCCCTCAGAGCCTCTTTGCGTGAAGATCCTGATATCATCCTTGTGGGGGAAATGCGGGACTTAGAAACCATTA
GTTTAGCCATTACGGCGGCTGAAACGGGACACTTAGTCTTTGGAACCCTACACACCAACTCCGCCGCAGGAACTATTGAC
CGGATTATTGATGTGTTTCCAGCTAATCAACAGGCACAAATTCGCGCCATGCTGTCTAATTCTTTATTAGCGGTTTTTAG
CCAATGTTTAGTCAAAAAGAAAAGCCCCAAACCAGGGGAATTTGGACGAGCCATGGCTCAAGAAATTATGGTAATTACGC
CAGCGATCGCTAACTTGATTCGGGAAGGAAAAGCCTCTCAAATTTATTCGGCTATTCAAACGGGGATGAAACTGGGAATG
CAAACTATGGAACAAGCCTTAACCAACCTAGTAGTGAGTGGTGTAGTATCATTTGAAGAGGCGATCGCTAAAAGTGGCAA
ACCCGATGAATTACAACGTTTAATTGCTGGTGCGGGGATGGGTAACGCGGCTAAAGCCAAAGCTCGCCTTTAA
ATGGATTTAATGATCGAAGACTTGATGGAACAGTTGGTCGAAATGGGGGGCTCGGATATGCACATCCAAGCGGGAGCCCC
CATCTATTTCCGCATCAGTGGTAAACTTGCTCCCATTTCAGAAGAACCCCTGTCTCCCCAAGACAGCCAAAAACTGATTT
TTAGTATGCTCAATAACTCCCAACGCAAAGAGTTAGAGCAAAACTGGGAATTAGACTGTTCCTATGGGGTCAAAGGGTTA
GCGCGGTTTCGGGTGAATGTTTATAAAGAAAGGGGCTGTTATGCGGCTTGTTTACGCGCCCTGTCTTCTAAAATTCCCAA
TTTTGAACAGTTAGGACTACCAACGATTATTCGAGAAATGGCCGAACGTCCTAGAGGGATGGTTCTGGTAACAGGACAAA
CGGGATCAGGAAAAACGACCACCCTTGCAGCGATTTTAGATTTAATTAATCGCACCCGTGGAGAGCATATTCTAACGGTG
GAAGATCCCATTGAATACGTTTTTCCTAATATTAAAAGCCTGTTTCATCAACGCCAAAAAGGAGAAGATACCAAATCCTT
TGCCAACGCCCTCAGAGCCTCTTTGCGTGAAGATCCTGATATCATCCTTGTGGGGGAAATGCGGGACTTAGAAACCATTA
GTTTAGCCATTACGGCGGCTGAAACGGGACACTTAGTCTTTGGAACCCTACACACCAACTCCGCCGCAGGAACTATTGAC
CGGATTATTGATGTGTTTCCAGCTAATCAACAGGCACAAATTCGCGCCATGCTGTCTAATTCTTTATTAGCGGTTTTTAG
CCAATGTTTAGTCAAAAAGAAAAGCCCCAAACCAGGGGAATTTGGACGAGCCATGGCTCAAGAAATTATGGTAATTACGC
CAGCGATCGCTAACTTGATTCGGGAAGGAAAAGCCTCTCAAATTTATTCGGCTATTCAAACGGGGATGAAACTGGGAATG
CAAACTATGGAACAAGCCTTAACCAACCTAGTAGTGAGTGGTGTAGTATCATTTGAAGAGGCGATCGCTAAAAGTGGCAA
ACCCGATGAATTACAACGTTTAATTGCTGGTGCGGGGATGGGTAACGCGGCTAAAGCCAAAGCTCGCCTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Legionella pneumophila strain Lp02 |
54.783 |
93.243 |
0.511 |
| pilT | Legionella pneumophila strain ERS1305867 |
54.783 |
93.243 |
0.511 |
| pilT | Acinetobacter baumannii D1279779 |
52.161 |
93.784 |
0.489 |
| pilT | Acinetobacter baumannii strain A118 |
52.161 |
93.784 |
0.489 |
| pilT | Acinetobacter nosocomialis M2 |
52.161 |
93.784 |
0.489 |
| pilT | Pseudomonas aeruginosa PAK |
51.873 |
93.784 |
0.486 |
| pilT | Acinetobacter baylyi ADP1 |
51.585 |
93.784 |
0.484 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
51.613 |
92.162 |
0.476 |
| pilT | Vibrio cholerae strain A1552 |
51.613 |
92.162 |
0.476 |
| pilT | Pseudomonas stutzeri DSM 10701 |
50.432 |
93.784 |
0.473 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
47.268 |
98.919 |
0.468 |
| pilT | Neisseria meningitidis 8013 |
49.853 |
91.622 |
0.457 |
| pilT | Neisseria gonorrhoeae MS11 |
49.558 |
91.622 |
0.454 |
| pilU | Pseudomonas stutzeri DSM 10701 |
38.746 |
94.865 |
0.368 |