Detailed information
Bioinformatically predicted
Overview
| Name | pilA/pilA1 | Type | Machinery gene |
| Locus tag | EMIN_RS08555 | Genome accession | NC_010644 |
| Coordinates | 383740..383901 (-) | Length | 53 a.a. |
| NCBI ID | WP_238523718.1 | Uniprot ID | - |
| Organism | Elusimicrobium minutum Pei191 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 378740..388901
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EMIN_RS01810 (Emin_0354) | - | 379437..380477 (+) | 1041 | WP_012414528.1 | M42 family metallopeptidase | - |
| EMIN_RS01815 (Emin_0355) | - | 380517..382847 (+) | 2331 | WP_012414529.1 | transketolase-like TK C-terminal-containing protein | - |
| EMIN_RS01820 (Emin_0356) | - | 382922..383350 (+) | 429 | WP_012414530.1 | PPC domain-containing DNA-binding protein | - |
| EMIN_RS08555 | pilA/pilA1 | 383740..383901 (-) | 162 | WP_238523718.1 | hypothetical protein | Machinery gene |
| EMIN_RS01830 (Emin_0358) | era | 383970..384872 (+) | 903 | WP_012414531.1 | GTPase Era | - |
| EMIN_RS01835 (Emin_0359) | - | 384862..386208 (-) | 1347 | WP_012414532.1 | hypothetical protein | - |
| EMIN_RS01840 (Emin_0360) | - | 386292..387275 (-) | 984 | WP_012414533.1 | SPFH domain-containing protein | - |
| EMIN_RS01845 (Emin_0361) | - | 387457..387882 (-) | 426 | WP_012414534.1 | NfeD family protein | - |
| EMIN_RS01850 (Emin_0362) | - | 387892..388728 (-) | 837 | WP_012414535.1 | transglutaminase-like domain-containing protein | - |
Sequence
Protein
Download Length: 53 a.a. Molecular weight: 5769.19 Da Isoelectric Point: 10.8766
>NTDB_id=30808 EMIN_RS08555 WP_238523718.1 383740..383901(-) (pilA/pilA1) [Elusimicrobium minutum Pei191]
MFINKKAFILIKLLLVVLIIGILAAIALPQYSKAVLKARAADALSKINTLYQA
MFINKKAFILIKLLLVVLIIGILAAIALPQYSKAVLKARAADALSKINTLYQA
Nucleotide
Download Length: 162 bp
>NTDB_id=30808 EMIN_RS08555 WP_238523718.1 383740..383901(-) (pilA/pilA1) [Elusimicrobium minutum Pei191]
GTGTTTATAAACAAAAAAGCTTTTATTCTTATTAAACTGTTGCTTGTTGTTTTAATTATAGGCATACTTGCCGCCATTGC
GCTTCCTCAATATAGTAAAGCCGTGCTAAAAGCTCGCGCGGCTGACGCTCTTTCAAAAATTAACACCTTATACCAGGCTT
AG
GTGTTTATAAACAAAAAAGCTTTTATTCTTATTAAACTGTTGCTTGTTGTTTTAATTATAGGCATACTTGCCGCCATTGC
GCTTCCTCAATATAGTAAAGCCGTGCTAAAAGCTCGCGCGGCTGACGCTCTTTCAAAAATTAACACCTTATACCAGGCTT
AG
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter nosocomialis M2 |
46.429 |
100 |
0.491 |
| pilA/pilA1 | Synechocystis sp. PCC 6803 |
55.319 |
88.679 |
0.491 |
| pilA | Pseudomonas aeruginosa PAK |
54.348 |
86.792 |
0.472 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
55.814 |
81.132 |
0.453 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
54.762 |
79.245 |
0.434 |
| pilA | Acinetobacter baumannii strain A118 |
47.826 |
86.792 |
0.415 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
47.826 |
86.792 |
0.415 |
| pilA | Vibrio cholerae strain A1552 |
47.826 |
86.792 |
0.415 |
| pilA | Vibrio cholerae C6706 |
47.826 |
86.792 |
0.415 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
51.22 |
77.358 |
0.396 |
| pilV | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
43.75 |
90.566 |
0.396 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
48.837 |
81.132 |
0.396 |
| pilA2 | Legionella pneumophila str. Paris |
48.837 |
81.132 |
0.396 |
| pilA/pilA1 | Eikenella corrodens VA1 |
50 |
75.472 |
0.377 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
50 |
75.472 |
0.377 |