Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | OTER_RS15610 | Genome accession | NC_010571 |
| Coordinates | 4017433..4018515 (+) | Length | 360 a.a. |
| NCBI ID | WP_012375893.1 | Uniprot ID | B1ZZG1 |
| Organism | Opitutus terrae PB90-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4012433..4023515
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OTER_RS15595 (Oter_3081) | coaE | 4013033..4013617 (+) | 585 | WP_012375890.1 | dephospho-CoA kinase | - |
| OTER_RS26680 (Oter_3082) | rho | 4013690..4015567 (+) | 1878 | WP_083767753.1 | transcription termination factor Rho | - |
| OTER_RS15605 (Oter_3083) | - | 4015651..4017339 (+) | 1689 | WP_237702368.1 | GspE/PulE family protein | - |
| OTER_RS15610 (Oter_3084) | pilT | 4017433..4018515 (+) | 1083 | WP_012375893.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| OTER_RS15615 (Oter_3085) | - | 4018591..4020273 (+) | 1683 | WP_012375894.1 | GspE/PulE family protein | - |
| OTER_RS15620 (Oter_3086) | - | 4020287..4021606 (+) | 1320 | WP_012375895.1 | type II secretion system F family protein | - |
| OTER_RS15625 (Oter_3087) | - | 4021639..4022631 (-) | 993 | WP_012375896.1 | HD domain-containing protein | - |
| OTER_RS15630 (Oter_3088) | - | 4022751..4023383 (+) | 633 | WP_012375897.1 | DUF2238 domain-containing protein | - |
Sequence
Protein
Download Length: 360 a.a. Molecular weight: 39524.71 Da Isoelectric Point: 6.9116
>NTDB_id=30552 OTER_RS15610 WP_012375893.1 4017433..4018515(+) (pilT) [Opitutus terrae PB90-1]
MSYEMNELLDLVVDQNASDLHLQVGQPPTLRISGSMLPIEGPNLTPADTEKLMLSVTPDNHISSVKLNGGADFGFAFGEK
ARFRVSVLKAKGNYGMVLRQIPYKMFGLRDIGLPDKVRELLYRPRGLILVTGPTGSGKSTPLASMINYINENRDGHIITI
EDPIEYYHNHKRCVVTQREIGSDVPSFAEAIRRALRQDPDIILVGEMRDLETIEAAISAAETGHLVFGTLHTNSAAKTID
RIVDAFPATMKDMIRTQLASSVQAVISQVLCKKVGGGRIAGYEIMITTTSIASLIRENKTFRIPSDIQTGANLGMITMDT
HLMSLFNRELISADECVEKAQDPVAMREKLVGMGAKLKTL
MSYEMNELLDLVVDQNASDLHLQVGQPPTLRISGSMLPIEGPNLTPADTEKLMLSVTPDNHISSVKLNGGADFGFAFGEK
ARFRVSVLKAKGNYGMVLRQIPYKMFGLRDIGLPDKVRELLYRPRGLILVTGPTGSGKSTPLASMINYINENRDGHIITI
EDPIEYYHNHKRCVVTQREIGSDVPSFAEAIRRALRQDPDIILVGEMRDLETIEAAISAAETGHLVFGTLHTNSAAKTID
RIVDAFPATMKDMIRTQLASSVQAVISQVLCKKVGGGRIAGYEIMITTTSIASLIRENKTFRIPSDIQTGANLGMITMDT
HLMSLFNRELISADECVEKAQDPVAMREKLVGMGAKLKTL
Nucleotide
Download Length: 1083 bp
>NTDB_id=30552 OTER_RS15610 WP_012375893.1 4017433..4018515(+) (pilT) [Opitutus terrae PB90-1]
ATGAGCTACGAAATGAACGAACTGCTCGACCTCGTGGTCGACCAAAATGCCTCGGATCTCCACCTGCAGGTCGGCCAGCC
GCCGACGCTCCGGATCAGTGGCAGCATGCTGCCGATCGAAGGGCCGAATCTCACCCCGGCGGATACGGAGAAACTGATGC
TCTCGGTCACGCCGGACAATCACATCAGCAGCGTGAAGCTCAACGGCGGCGCGGATTTCGGGTTCGCGTTCGGTGAGAAG
GCCCGGTTCCGCGTGTCGGTGCTCAAGGCCAAGGGCAACTACGGCATGGTGCTGCGCCAGATTCCCTACAAGATGTTTGG
GCTGCGGGACATTGGACTGCCGGACAAGGTGCGCGAGTTGCTCTACCGGCCGCGCGGGCTCATTCTCGTCACCGGCCCGA
CCGGGTCCGGCAAATCGACGCCGCTCGCGTCGATGATCAACTACATTAACGAGAATCGCGACGGGCACATCATCACGATC
GAGGATCCGATCGAGTATTATCACAACCACAAGCGGTGCGTGGTGACGCAGCGGGAGATCGGTTCGGACGTGCCCAGTTT
CGCGGAGGCGATTCGCCGCGCGCTGCGCCAGGATCCGGACATCATCCTCGTCGGCGAAATGCGCGACCTCGAGACGATCG
AGGCGGCGATCAGCGCGGCGGAAACGGGACACCTCGTGTTCGGCACGCTGCACACCAACAGCGCGGCCAAGACGATTGAC
CGCATCGTCGACGCGTTTCCCGCGACGATGAAGGACATGATCCGGACCCAGCTTGCTTCGTCGGTGCAGGCGGTGATTTC
CCAGGTGCTGTGCAAGAAAGTCGGCGGCGGCCGCATCGCCGGCTACGAGATCATGATCACCACGACGTCGATCGCGTCGC
TGATCCGCGAGAACAAGACGTTCCGCATTCCGTCCGACATTCAGACCGGCGCGAACCTTGGGATGATCACCATGGATACG
CACCTGATGAGCCTCTTCAACCGGGAGCTCATCAGTGCCGACGAATGTGTGGAAAAAGCGCAGGATCCCGTGGCGATGCG
CGAGAAGCTCGTCGGCATGGGCGCGAAGCTGAAGACCCTGTGA
ATGAGCTACGAAATGAACGAACTGCTCGACCTCGTGGTCGACCAAAATGCCTCGGATCTCCACCTGCAGGTCGGCCAGCC
GCCGACGCTCCGGATCAGTGGCAGCATGCTGCCGATCGAAGGGCCGAATCTCACCCCGGCGGATACGGAGAAACTGATGC
TCTCGGTCACGCCGGACAATCACATCAGCAGCGTGAAGCTCAACGGCGGCGCGGATTTCGGGTTCGCGTTCGGTGAGAAG
GCCCGGTTCCGCGTGTCGGTGCTCAAGGCCAAGGGCAACTACGGCATGGTGCTGCGCCAGATTCCCTACAAGATGTTTGG
GCTGCGGGACATTGGACTGCCGGACAAGGTGCGCGAGTTGCTCTACCGGCCGCGCGGGCTCATTCTCGTCACCGGCCCGA
CCGGGTCCGGCAAATCGACGCCGCTCGCGTCGATGATCAACTACATTAACGAGAATCGCGACGGGCACATCATCACGATC
GAGGATCCGATCGAGTATTATCACAACCACAAGCGGTGCGTGGTGACGCAGCGGGAGATCGGTTCGGACGTGCCCAGTTT
CGCGGAGGCGATTCGCCGCGCGCTGCGCCAGGATCCGGACATCATCCTCGTCGGCGAAATGCGCGACCTCGAGACGATCG
AGGCGGCGATCAGCGCGGCGGAAACGGGACACCTCGTGTTCGGCACGCTGCACACCAACAGCGCGGCCAAGACGATTGAC
CGCATCGTCGACGCGTTTCCCGCGACGATGAAGGACATGATCCGGACCCAGCTTGCTTCGTCGGTGCAGGCGGTGATTTC
CCAGGTGCTGTGCAAGAAAGTCGGCGGCGGCCGCATCGCCGGCTACGAGATCATGATCACCACGACGTCGATCGCGTCGC
TGATCCGCGAGAACAAGACGTTCCGCATTCCGTCCGACATTCAGACCGGCGCGAACCTTGGGATGATCACCATGGATACG
CACCTGATGAGCCTCTTCAACCGGGAGCTCATCAGTGCCGACGAATGTGTGGAAAAAGCGCAGGATCCCGTGGCGATGCG
CGAGAAGCTCGTCGGCATGGGCGCGAAGCTGAAGACCCTGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas stutzeri DSM 10701 |
51.765 |
94.444 |
0.489 |
| pilT | Acinetobacter baumannii D1279779 |
51.765 |
94.444 |
0.489 |
| pilT | Acinetobacter baumannii strain A118 |
51.765 |
94.444 |
0.489 |
| pilT | Acinetobacter nosocomialis M2 |
51.765 |
94.444 |
0.489 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
50.44 |
94.722 |
0.478 |
| pilT | Pseudomonas aeruginosa PAK |
50.588 |
94.444 |
0.478 |
| pilT | Acinetobacter baylyi ADP1 |
50.588 |
94.444 |
0.478 |
| pilT | Legionella pneumophila strain Lp02 |
49.258 |
93.611 |
0.461 |
| pilT | Legionella pneumophila strain ERS1305867 |
49.258 |
93.611 |
0.461 |
| pilT | Neisseria meningitidis 8013 |
47.384 |
95.556 |
0.453 |
| pilT | Neisseria gonorrhoeae MS11 |
47.093 |
95.556 |
0.45 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
47.633 |
93.889 |
0.447 |
| pilT | Vibrio cholerae strain A1552 |
47.633 |
93.889 |
0.447 |
| pilU | Acinetobacter baylyi ADP1 |
39.017 |
96.111 |
0.375 |
| pilU | Pseudomonas stutzeri DSM 10701 |
37.971 |
95.833 |
0.364 |