Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | SYNPCC7002_RS03490 | Genome accession | NC_010475 |
| Coordinates | 728330..729436 (+) | Length | 368 a.a. |
| NCBI ID | WP_012306326.1 | Uniprot ID | A0AAE8IT29 |
| Organism | Picosynechococcus sp. PCC 7002 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 723330..734436
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SYNPCC7002_RS03480 (SYNPCC7002_A0695) | grpE | 725030..725779 (-) | 750 | WP_012306324.1 | nucleotide exchange factor GrpE | - |
| SYNPCC7002_RS03485 (SYNPCC7002_A0696) | pilB/pilB1 | 726189..728210 (+) | 2022 | WP_012306325.1 | GspE/PulE family protein | Machinery gene |
| SYNPCC7002_RS03490 (SYNPCC7002_A0697) | pilT | 728330..729436 (+) | 1107 | WP_012306326.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| SYNPCC7002_RS03495 (SYNPCC7002_A0699) | - | 729503..730741 (+) | 1239 | WP_012306328.1 | type II secretion system F family protein | - |
| SYNPCC7002_RS03500 (SYNPCC7002_A0700) | - | 730750..731307 (+) | 558 | WP_012306329.1 | hypothetical protein | - |
| SYNPCC7002_RS03505 (SYNPCC7002_A0701) | - | 731304..732380 (-) | 1077 | WP_012306330.1 | hypothetical protein | - |
| SYNPCC7002_RS03510 (SYNPCC7002_A0702) | - | 732408..733571 (-) | 1164 | WP_041443364.1 | class I SAM-dependent methyltransferase | - |
Sequence
Protein
Download Length: 368 a.a. Molecular weight: 40328.45 Da Isoelectric Point: 6.7536
>NTDB_id=30245 SYNPCC7002_RS03490 WP_012306326.1 728330..729436(+) (pilT) [Picosynechococcus sp. PCC 7002]
MDYMIEDLMEQLVEMGGSDMHIQAGAPVYFRVSGKLGPINDEPLSAQDAQKLIFSMLNNTQRKDLEQNWELDCSYGVKGL
ARFRVNVYKERGCYAACLRALSSKIPNFDQLGLPDIVREMAERPRGLVLVTGQTGSGKTTTMAAMLDLINRTRAEHILTV
EDPIEYVFPNHKSLFHQRQKGEDTKSFANALRAALREDPDIILVGEMRDLETISLAISAAETGHLVFGTLHTNSAASTID
RMLDVFPPIQQPQIRAMLSNSLLAVFSQCLVKKANPKPGEFGRSMAQEIMVVTPAIANLIREGKSAQVYSAIQTGMKLGM
QTMEQALAGLVATGTVTFEEALSKSGKPDELQRLVGGALGASPTAKRR
MDYMIEDLMEQLVEMGGSDMHIQAGAPVYFRVSGKLGPINDEPLSAQDAQKLIFSMLNNTQRKDLEQNWELDCSYGVKGL
ARFRVNVYKERGCYAACLRALSSKIPNFDQLGLPDIVREMAERPRGLVLVTGQTGSGKTTTMAAMLDLINRTRAEHILTV
EDPIEYVFPNHKSLFHQRQKGEDTKSFANALRAALREDPDIILVGEMRDLETISLAISAAETGHLVFGTLHTNSAASTID
RMLDVFPPIQQPQIRAMLSNSLLAVFSQCLVKKANPKPGEFGRSMAQEIMVVTPAIANLIREGKSAQVYSAIQTGMKLGM
QTMEQALAGLVATGTVTFEEALSKSGKPDELQRLVGGALGASPTAKRR
Nucleotide
Download Length: 1107 bp
>NTDB_id=30245 SYNPCC7002_RS03490 WP_012306326.1 728330..729436(+) (pilT) [Picosynechococcus sp. PCC 7002]
ATGGATTACATGATCGAAGACCTCATGGAGCAACTCGTAGAAATGGGCGGCTCCGATATGCACATCCAGGCCGGTGCCCC
CGTTTACTTCCGAGTCAGTGGGAAACTTGGCCCCATTAATGACGAGCCCCTCTCCGCCCAAGATGCCCAAAAGCTCATCT
TCAGTATGCTCAACAACACCCAACGCAAAGACCTCGAGCAAAATTGGGAACTAGACTGTTCCTATGGCGTGAAAGGACTC
GCGCGCTTCCGGGTCAATGTCTACAAAGAACGGGGCTGTTATGCCGCTTGCCTGCGGGCCTTGTCCTCGAAAATTCCCAA
CTTTGATCAACTCGGTTTACCCGATATTGTGCGGGAAATGGCCGAGCGTCCCCGGGGTTTGGTGCTGGTTACGGGCCAAA
CGGGTTCCGGGAAAACCACCACCATGGCTGCGATGTTGGATTTGATCAACCGCACCCGTGCCGAACATATCCTCACCGTC
GAAGACCCCATTGAATACGTTTTCCCAAACCACAAAAGCCTCTTCCACCAACGGCAAAAGGGAGAAGACACGAAAAGCTT
TGCCAATGCGCTCCGGGCCGCGCTCCGGGAAGATCCAGACATCATCCTCGTCGGGGAAATGCGGGATCTCGAAACCATCT
CCTTGGCTATCTCCGCCGCTGAAACTGGGCACTTGGTTTTCGGGACGCTCCACACCAACTCCGCCGCCAGCACCATCGAC
CGGATGTTAGATGTGTTCCCGCCGATTCAACAGCCCCAAATTCGGGCGATGCTCTCCAACTCTCTCTTGGCTGTTTTTAG
TCAATGTCTAGTGAAAAAAGCGAATCCGAAACCCGGTGAATTCGGGCGCTCTATGGCCCAAGAAATTATGGTTGTCACCC
CGGCGATCGCCAACCTGATTCGTGAAGGAAAAAGCGCCCAGGTCTACTCAGCAATCCAAACGGGAATGAAACTCGGCATG
CAAACCATGGAGCAAGCCCTGGCGGGTTTAGTGGCCACAGGCACCGTTACCTTTGAAGAAGCCCTGTCGAAGAGTGGTAA
ACCCGATGAACTACAACGACTCGTTGGGGGAGCCTTGGGGGCTAGCCCAACCGCAAAACGTCGCTAA
ATGGATTACATGATCGAAGACCTCATGGAGCAACTCGTAGAAATGGGCGGCTCCGATATGCACATCCAGGCCGGTGCCCC
CGTTTACTTCCGAGTCAGTGGGAAACTTGGCCCCATTAATGACGAGCCCCTCTCCGCCCAAGATGCCCAAAAGCTCATCT
TCAGTATGCTCAACAACACCCAACGCAAAGACCTCGAGCAAAATTGGGAACTAGACTGTTCCTATGGCGTGAAAGGACTC
GCGCGCTTCCGGGTCAATGTCTACAAAGAACGGGGCTGTTATGCCGCTTGCCTGCGGGCCTTGTCCTCGAAAATTCCCAA
CTTTGATCAACTCGGTTTACCCGATATTGTGCGGGAAATGGCCGAGCGTCCCCGGGGTTTGGTGCTGGTTACGGGCCAAA
CGGGTTCCGGGAAAACCACCACCATGGCTGCGATGTTGGATTTGATCAACCGCACCCGTGCCGAACATATCCTCACCGTC
GAAGACCCCATTGAATACGTTTTCCCAAACCACAAAAGCCTCTTCCACCAACGGCAAAAGGGAGAAGACACGAAAAGCTT
TGCCAATGCGCTCCGGGCCGCGCTCCGGGAAGATCCAGACATCATCCTCGTCGGGGAAATGCGGGATCTCGAAACCATCT
CCTTGGCTATCTCCGCCGCTGAAACTGGGCACTTGGTTTTCGGGACGCTCCACACCAACTCCGCCGCCAGCACCATCGAC
CGGATGTTAGATGTGTTCCCGCCGATTCAACAGCCCCAAATTCGGGCGATGCTCTCCAACTCTCTCTTGGCTGTTTTTAG
TCAATGTCTAGTGAAAAAAGCGAATCCGAAACCCGGTGAATTCGGGCGCTCTATGGCCCAAGAAATTATGGTTGTCACCC
CGGCGATCGCCAACCTGATTCGTGAAGGAAAAAGCGCCCAGGTCTACTCAGCAATCCAAACGGGAATGAAACTCGGCATG
CAAACCATGGAGCAAGCCCTGGCGGGTTTAGTGGCCACAGGCACCGTTACCTTTGAAGAAGCCCTGTCGAAGAGTGGTAA
ACCCGATGAACTACAACGACTCGTTGGGGGAGCCTTGGGGGCTAGCCCAACCGCAAAACGTCGCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Legionella pneumophila strain ERS1305867 |
53.913 |
93.75 |
0.505 |
| pilT | Legionella pneumophila strain Lp02 |
53.913 |
93.75 |
0.505 |
| pilT | Pseudomonas aeruginosa PAK |
52.738 |
94.293 |
0.497 |
| pilT | Acinetobacter baumannii D1279779 |
52.45 |
94.293 |
0.495 |
| pilT | Acinetobacter baumannii strain A118 |
52.45 |
94.293 |
0.495 |
| pilT | Acinetobacter nosocomialis M2 |
52.161 |
94.293 |
0.492 |
| pilT | Acinetobacter baylyi ADP1 |
51.873 |
94.293 |
0.489 |
| pilT | Pseudomonas stutzeri DSM 10701 |
51.585 |
94.293 |
0.486 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
51.026 |
92.663 |
0.473 |
| pilT | Vibrio cholerae strain A1552 |
51.026 |
92.663 |
0.473 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
48.87 |
96.196 |
0.47 |
| pilT | Neisseria meningitidis 8013 |
49.555 |
91.576 |
0.454 |
| pilT | Neisseria gonorrhoeae MS11 |
49.258 |
91.576 |
0.451 |
| pilU | Pseudomonas stutzeri DSM 10701 |
37.892 |
95.38 |
0.361 |