Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | AM1_RS01810 | Genome accession | NC_009925 |
| Coordinates | 391768..392889 (-) | Length | 373 a.a. |
| NCBI ID | WP_012161082.1 | Uniprot ID | B0CAY5 |
| Organism | Acaryochloris marina MBIC11017 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 386768..397889
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM1_RS01785 (AM1_0413) | cdaA | 387409..388323 (+) | 915 | WP_012161080.1 | diadenylate cyclase CdaA | - |
| AM1_RS01790 (AM1_0414) | - | 388320..389072 (+) | 753 | WP_010473380.1 | isoprenyl transferase | - |
| AM1_RS01795 (AM1_0415) | - | 389243..389524 (-) | 282 | WP_010473382.1 | DUF3143 domain-containing protein | - |
| AM1_RS01800 (AM1_0416) | - | 389862..390299 (-) | 438 | WP_148215651.1 | J domain-containing protein | - |
| AM1_RS01805 (AM1_0417) | - | 390490..391710 (-) | 1221 | WP_010473386.1 | type II secretion system F family protein | - |
| AM1_RS01810 (AM1_0418) | pilT | 391768..392889 (-) | 1122 | WP_012161082.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| AM1_RS01815 (AM1_0419) | pilB/pilB1 | 392968..394974 (-) | 2007 | WP_012161083.1 | GspE/PulE family protein | Machinery gene |
| AM1_RS01820 (AM1_0421) | grpE | 395595..396383 (+) | 789 | WP_012161085.1 | nucleotide exchange factor GrpE | - |
Sequence
Protein
Download Length: 373 a.a. Molecular weight: 41155.14 Da Isoelectric Point: 6.9771
>NTDB_id=29397 AM1_RS01810 WP_012161082.1 391768..392889(-) (pilT) [Acaryochloris marina MBIC11017]
MDYMIEDLMEEVVERGGSDLHLSVGLPPYIRINGKLTPTDYDPLSQEQCQRLIFSMLNNTQRKQLEQTWELDCSYGVRGL
ARFRVNVYKDRGTYAAALRALSSKIPSIETLGLPNIVREMSEKPRGLVLVTGPTGSGKTTTLASMINNINLTRAEHILTV
EDPIEFVYEPIKSLIHQRQVGEDTKSFANALRAALREDPDVILVGEMRDLETIQLAISAAETGHLVFGTLHTSSAAQTVD
RMVDVFPPEQQTQVRVQLSNSLVAVFSQTLVTRKNPKPGEFGRVMAQEIMVSTPGIANLIREGKTSQIYSAIQTGGKLGM
VTLEKVLAELYRAGTISFESAVSKTSRPDEMQRLMGAAPMGNQRGSGAAPYRR
MDYMIEDLMEEVVERGGSDLHLSVGLPPYIRINGKLTPTDYDPLSQEQCQRLIFSMLNNTQRKQLEQTWELDCSYGVRGL
ARFRVNVYKDRGTYAAALRALSSKIPSIETLGLPNIVREMSEKPRGLVLVTGPTGSGKTTTLASMINNINLTRAEHILTV
EDPIEFVYEPIKSLIHQRQVGEDTKSFANALRAALREDPDVILVGEMRDLETIQLAISAAETGHLVFGTLHTSSAAQTVD
RMVDVFPPEQQTQVRVQLSNSLVAVFSQTLVTRKNPKPGEFGRVMAQEIMVSTPGIANLIREGKTSQIYSAIQTGGKLGM
VTLEKVLAELYRAGTISFESAVSKTSRPDEMQRLMGAAPMGNQRGSGAAPYRR
Nucleotide
Download Length: 1122 bp
>NTDB_id=29397 AM1_RS01810 WP_012161082.1 391768..392889(-) (pilT) [Acaryochloris marina MBIC11017]
ATGGACTACATGATTGAAGATCTGATGGAAGAGGTCGTTGAACGGGGAGGCTCCGATTTACACCTCTCAGTAGGCTTACC
TCCCTACATTCGTATCAACGGAAAATTAACTCCTACTGATTATGATCCGCTCAGTCAAGAGCAATGTCAGCGTCTTATCT
TTAGCATGCTGAATAACACTCAACGTAAGCAGCTAGAGCAAACATGGGAACTAGATTGTTCCTATGGTGTGAGGGGCCTA
GCTCGGTTTAGGGTAAATGTCTATAAAGACCGAGGGACTTATGCTGCGGCATTGCGTGCTCTTAGCTCTAAAATTCCTTC
TATCGAAACATTAGGACTCCCCAATATTGTCCGAGAAATGTCGGAAAAACCACGGGGGTTGGTCCTCGTTACGGGGCCTA
CCGGTTCAGGGAAAACAACCACCCTTGCCTCCATGATTAACAATATCAATCTAACTCGGGCTGAGCATATTCTTACGGTG
GAAGATCCCATTGAATTTGTTTATGAACCCATTAAAAGTTTGATTCATCAACGTCAGGTTGGTGAAGATACCAAAAGCTT
TGCGAATGCGCTACGAGCAGCTCTTCGTGAAGATCCAGATGTTATTCTGGTTGGGGAAATGCGGGATCTCGAAACCATTC
AACTTGCTATCTCTGCAGCAGAAACAGGTCACTTGGTTTTTGGGACACTTCATACCAGTTCAGCTGCTCAAACGGTCGAT
CGAATGGTAGATGTCTTTCCACCTGAGCAACAGACTCAAGTTCGAGTGCAATTGTCTAACTCTTTAGTCGCTGTATTTAG
CCAAACGCTGGTGACACGAAAGAACCCAAAACCAGGCGAGTTTGGGCGAGTCATGGCCCAAGAAATTATGGTATCAACAC
CTGGAATTGCTAACTTAATTCGTGAAGGGAAAACGTCCCAGATCTATTCTGCGATTCAAACTGGTGGAAAGTTGGGGATG
GTAACGTTGGAAAAAGTTTTAGCAGAACTGTATCGTGCAGGTACGATTTCCTTTGAATCTGCTGTATCAAAAACCTCCCG
ACCTGATGAAATGCAACGCCTTATGGGGGCAGCTCCTATGGGGAATCAACGTGGCTCTGGTGCCGCACCCTATCGGCGAT
AA
ATGGACTACATGATTGAAGATCTGATGGAAGAGGTCGTTGAACGGGGAGGCTCCGATTTACACCTCTCAGTAGGCTTACC
TCCCTACATTCGTATCAACGGAAAATTAACTCCTACTGATTATGATCCGCTCAGTCAAGAGCAATGTCAGCGTCTTATCT
TTAGCATGCTGAATAACACTCAACGTAAGCAGCTAGAGCAAACATGGGAACTAGATTGTTCCTATGGTGTGAGGGGCCTA
GCTCGGTTTAGGGTAAATGTCTATAAAGACCGAGGGACTTATGCTGCGGCATTGCGTGCTCTTAGCTCTAAAATTCCTTC
TATCGAAACATTAGGACTCCCCAATATTGTCCGAGAAATGTCGGAAAAACCACGGGGGTTGGTCCTCGTTACGGGGCCTA
CCGGTTCAGGGAAAACAACCACCCTTGCCTCCATGATTAACAATATCAATCTAACTCGGGCTGAGCATATTCTTACGGTG
GAAGATCCCATTGAATTTGTTTATGAACCCATTAAAAGTTTGATTCATCAACGTCAGGTTGGTGAAGATACCAAAAGCTT
TGCGAATGCGCTACGAGCAGCTCTTCGTGAAGATCCAGATGTTATTCTGGTTGGGGAAATGCGGGATCTCGAAACCATTC
AACTTGCTATCTCTGCAGCAGAAACAGGTCACTTGGTTTTTGGGACACTTCATACCAGTTCAGCTGCTCAAACGGTCGAT
CGAATGGTAGATGTCTTTCCACCTGAGCAACAGACTCAAGTTCGAGTGCAATTGTCTAACTCTTTAGTCGCTGTATTTAG
CCAAACGCTGGTGACACGAAAGAACCCAAAACCAGGCGAGTTTGGGCGAGTCATGGCCCAAGAAATTATGGTATCAACAC
CTGGAATTGCTAACTTAATTCGTGAAGGGAAAACGTCCCAGATCTATTCTGCGATTCAAACTGGTGGAAAGTTGGGGATG
GTAACGTTGGAAAAAGTTTTAGCAGAACTGTATCGTGCAGGTACGATTTCCTTTGAATCTGCTGTATCAAAAACCTCCCG
ACCTGATGAAATGCAACGCCTTATGGGGGCAGCTCCTATGGGGAATCAACGTGGCTCTGGTGCCGCACCCTATCGGCGAT
AA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
54.203 |
92.493 |
0.501 |
| pilT | Pseudomonas stutzeri DSM 10701 |
53.314 |
93.029 |
0.496 |
| pilT | Acinetobacter nosocomialis M2 |
52.754 |
92.493 |
0.488 |
| pilT | Acinetobacter baumannii D1279779 |
52.754 |
92.493 |
0.488 |
| pilT | Acinetobacter baumannii strain A118 |
52.754 |
92.493 |
0.488 |
| pilT | Legionella pneumophila strain Lp02 |
52.754 |
92.493 |
0.488 |
| pilT | Acinetobacter baylyi ADP1 |
52.754 |
92.493 |
0.488 |
| pilT | Legionella pneumophila strain ERS1305867 |
52.754 |
92.493 |
0.488 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
49.86 |
95.71 |
0.477 |
| pilT | Neisseria meningitidis 8013 |
50.72 |
93.029 |
0.472 |
| pilT | Neisseria gonorrhoeae MS11 |
50.432 |
93.029 |
0.469 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
50.294 |
91.153 |
0.458 |
| pilT | Vibrio cholerae strain A1552 |
50.294 |
91.153 |
0.458 |
| pilU | Pseudomonas stutzeri DSM 10701 |
39.031 |
94.102 |
0.367 |