Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   C7M29_RS05310 Genome accession   NZ_CP028217
Coordinates   1016997..1017791 (+) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis strain SRCM102751     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1011997..1022791
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M29_RS05290 (C7M29_01043) walR 1012239..1012946 (+) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -
  C7M29_RS05295 (C7M29_01044) walK 1012954..1014789 (+) 1836 WP_024572714.1 cell wall metabolism sensor histidine kinase WalK -
  C7M29_RS05300 (C7M29_01045) walH 1014779..1016146 (+) 1368 WP_003226936.1 WalRK two-component regulatory system regulator WalH -
  C7M29_RS05305 (C7M29_01046) walI 1016133..1016975 (+) 843 WP_161476546.1 WalRK two-component regulatory system regulator WalI -
  C7M29_RS05310 (C7M29_01047) vicX 1016997..1017791 (+) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  C7M29_RS05315 (C7M29_01048) htrA 1017873..1019075 (+) 1203 WP_015250812.1 serine protease HtrC Regulator
  C7M29_RS05320 - 1019096..1019222 (+) 127 Protein_981 hypothetical protein -
  C7M29_RS05325 (C7M29_01049) - 1019219..1019719 (-) 501 WP_161476547.1 PepSY domain-containing protein -
  C7M29_RS05330 (C7M29_01050) - 1019880..1020779 (-) 900 WP_015250814.1 PepSY domain-containing protein -
  C7M29_RS05335 (C7M29_01051) - 1020991..1021674 (+) 684 WP_038428106.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=240324 C7M29_RS05310 WP_003226939.1 1016997..1017791(+) (vicX) [Bacillus subtilis strain SRCM102751]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=240324 C7M29_RS05310 WP_003226939.1 1016997..1017791(+) (vicX) [Bacillus subtilis strain SRCM102751]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGTGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCGGAACCGATGTTTTATGTGTTCC
ATTATAACGGCCGAAAGCTCGCATTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGTGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTACAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACTGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53

Multiple sequence alignment