Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilE   Type   Machinery gene
Locus tag   BG910_RS06920 Genome accession   NZ_CP022278
Coordinates   1392930..1393373 (+) Length   147 a.a.
NCBI ID   WP_089036211.1    Uniprot ID   A0A220S1X7
Organism   Neisseria chenwenguii strain 10023     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1387930..1398373
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BG910_RS06880 (BG910_06870) minD 1388366..1389178 (+) 813 WP_089036204.1 septum site-determining protein MinD -
  BG910_RS06885 (BG910_06875) minE 1389182..1389442 (+) 261 WP_089036205.1 cell division topological specificity factor MinE -
  BG910_RS06890 (BG910_06880) - 1389446..1390366 (+) 921 WP_089036206.1 LysR substrate-binding domain-containing protein -
  BG910_RS06900 (BG910_06890) - 1390717..1390974 (+) 258 WP_089036207.1 type II toxin-antitoxin system Phd/YefM family antitoxin -
  BG910_RS06905 (BG910_06895) - 1390974..1391393 (+) 420 WP_089036208.1 type II toxin-antitoxin system VapC family toxin -
  BG910_RS06910 (BG910_06900) - 1391816..1392094 (+) 279 WP_089036209.1 type II toxin-antitoxin system RelB/DinJ family antitoxin -
  BG910_RS06915 (BG910_06905) - 1392087..1392344 (+) 258 WP_089036210.1 type II toxin-antitoxin system YafQ family toxin -
  BG910_RS06920 (BG910_06910) pilE 1392930..1393373 (+) 444 WP_089036211.1 pilin Machinery gene
  BG910_RS06925 (BG910_06915) - 1393473..1393916 (+) 444 WP_089036212.1 pilin -
  BG910_RS06930 (BG910_06920) - 1393939..1395357 (+) 1419 WP_089036213.1 sulfatase-like hydrolase/transferase -
  BG910_RS06935 (BG910_06925) - 1395671..1395979 (+) 309 WP_089036214.1 transcriptional regulator -
  BG910_RS06940 (BG910_06930) - 1395976..1396284 (+) 309 WP_089036215.1 DNA-binding transcriptional regulator -
  BG910_RS06945 (BG910_06935) - 1396331..1397134 (-) 804 WP_089036216.1 molybdopterin-binding protein -

Sequence

Protein


Download         Length: 147 a.a.        Molecular weight: 15207.52 Da        Isoelectric Point: 8.9409

>NTDB_id=237851 BG910_RS06920 WP_089036211.1 1392930..1393373(+) (pilE) [Neisseria chenwenguii strain 10023]
MKAIQKGFTLIELMIVVAIIGILAAIALPAYQDYTARAQISEAVSLADGQKAAVTEYYADKGQFPTSNKEAGIASSSTIT
GKYVKNVTVKADGVITALMKSSGVASGVTGASIVLTPKANNGSVSWTCDAKKGTADLEDKYIPAACR

Nucleotide


Download         Length: 444 bp        

>NTDB_id=237851 BG910_RS06920 WP_089036211.1 1392930..1393373(+) (pilE) [Neisseria chenwenguii strain 10023]
ATGAAAGCAATCCAAAAAGGTTTCACCCTGATCGAGTTGATGATCGTTGTCGCGATTATCGGTATTTTGGCCGCCATCGC
TCTGCCGGCTTACCAAGACTACACTGCCCGCGCGCAGATTTCTGAAGCTGTAAGCTTGGCTGACGGTCAAAAAGCAGCGG
TAACCGAATACTATGCCGATAAAGGTCAATTCCCGACAAGTAATAAGGAAGCCGGTATCGCTTCATCCTCTACCATTACC
GGTAAATATGTAAAAAATGTGACTGTTAAGGCTGACGGTGTGATTACTGCACTGATGAAAAGTTCAGGTGTGGCTTCAGG
TGTTACCGGTGCCTCCATCGTTCTGACTCCGAAAGCTAACAATGGTTCTGTTTCTTGGACATGTGATGCTAAAAAAGGTA
CTGCTGATTTGGAAGACAAATACATTCCTGCTGCCTGCCGTTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(4-28)

Pilin (bacterial filament) (Pilin)

(36-147)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A220S1X7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilE Neisseria gonorrhoeae MS11

55.28

100

0.605
  pilE Neisseria gonorrhoeae strain FA1090

54.088

100

0.585
  pilE Neisseria elongata subsp. glycolytica ATCC 29315

38.421

100

0.497
  pilA2 Legionella pneumophila str. Paris

49.306

97.959

0.483
  pilA/pilA1 Eikenella corrodens VA1

43.038

100

0.463
  pilA2 Legionella pneumophila strain ERS1305867

47.222

97.959

0.463
  pilA Ralstonia pseudosolanacearum GMI1000

39.521

100

0.449
  pilA/pilAI Pseudomonas stutzeri DSM 10701

42.763

100

0.442
  pilA Pseudomonas aeruginosa PAK

38.75

100

0.422
  comP Acinetobacter baylyi ADP1

39.474

100

0.408
  pilA Acinetobacter baumannii strain A118

38.255

100

0.388
  pilA Haemophilus influenzae 86-028NP

39.86

97.279

0.388
  pilA Vibrio campbellii strain DS40M4

37.748

100

0.388
  pilA/pilAII Pseudomonas stutzeri DSM 10701

36.735

100

0.367
  pilA Acinetobacter nosocomialis M2

44.262

82.993

0.367

Multiple sequence alignment