Detailed information NTG0227741

Bioinformatically predicted

Overview

• Name: pilE
• Type: Machinery gene
• Locus tag: XcfCFBP6166P_RS06965
• Genome accession: NZ_CP021001
• Coordinates: 1602023..1602463 (+)
• Length: 146 a.a.
• NCBI ID: WP_005934296.1
• Uniprot ID: -
• Organism: Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6166
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1597023..1607463

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
XcfCFBP6166P_RS06945 (XcfCFBP6166P_23480)	-	1597546..1598724 (-)	1179	WP_223842576.1	DUF6531 domain-containing protein	-
XcfCFBP6166P_RS06950 (XcfCFBP6166P_03075)	coaE	1598948..1599556 (-)	609	WP_022558665.1	dephospho-CoA kinase	-
XcfCFBP6166P_RS06955 (XcfCFBP6166P_03080)	-	1599570..1600433 (-)	864	WP_022558666.1	A24 family peptidase	-
XcfCFBP6166P_RS06960 (XcfCFBP6166P_03085)	pilC	1600440..1601696 (-)	1257	WP_007973903.1	type II secretion system F family protein	Machinery gene
XcfCFBP6166P_RS06965 (XcfCFBP6166P_03090)	pilE	1602023..1602463 (+)	441	WP_005934296.1	pilin	Machinery gene
XcfCFBP6166P_RS06970 (XcfCFBP6166P_03095)	-	1602572..1602973 (+)	402	WP_046121195.1	pilin	-
XcfCFBP6166P_RS06975 (XcfCFBP6166P_03100)	pilB	1603036..1604772 (+)	1737	WP_022558667.1	type IV-A pilus assembly ATPase PilB	Machinery gene
XcfCFBP6166P_RS06980 (XcfCFBP6166P_03110)	pilR	1605222..1606676 (-)	1455	WP_022558668.1	sigma-54 dependent transcriptional regulator	Regulator

Sequence

Protein

• Length: 146 a.a.
• Molecular weight: 14934.04 Da
• Isoelectric Point: 9.0090

>NTDB_id=227741 XcfCFBP6166P_RS06965 WP_005934296.1 1602023..1602463(+) (pilE) [Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6166]
MKKQNGFTLIELMIVVAIIAILAAIALPAYQDYLARSQVSEGLSLASGAKTAVAETYANTGAFPANNAAAGLETAANIKG
KYITSVTVSSGGVITALFNSSNAKLSGKNLVLTPTDNNGSISWGCSTGTTIDQKYLPTSCRTAATP

Nucleotide

• Length: 441 bp

>NTDB_id=227741 XcfCFBP6166P_RS06965 WP_005934296.1 1602023..1602463(+) (pilE) [Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6166]
ATGAAGAAGCAAAACGGTTTTACGTTGATCGAACTCATGATCGTGGTCGCGATCATTGCGATCCTGGCTGCAATTGCTCT
GCCGGCTTATCAGGACTACCTTGCGCGTTCGCAGGTTTCTGAAGGTCTGTCGCTGGCATCGGGTGCAAAGACCGCAGTTG
CTGAGACGTATGCCAACACTGGTGCATTTCCGGCCAACAACGCAGCGGCCGGTCTTGAGACTGCGGCAAACATCAAGGGT
AAGTACATCACCTCGGTGACCGTTAGCTCTGGTGGCGTCATCACTGCGCTGTTTAATAGCTCCAATGCGAAGCTGAGTGG
TAAGAACCTCGTCCTGACTCCGACGGACAACAACGGGTCGATTAGCTGGGGCTGCAGCACTGGCACCACCATCGATCAGA
AGTATCTGCCTACCTCTTGCCGTACTGCGGCTACCCCGTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (1-27)

• Pilin (bacterial filament) (Pilin) (35-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilE	Neisseria gonorrhoeae MS11	48.75	100	0.534
pilE	Neisseria gonorrhoeae strain FA1090	47.742	100	0.507
pilA2	Legionella pneumophila str. Paris	50.714	95.89	0.486
pilA2	Legionella pneumophila strain ERS1305867	50	95.89	0.479
pilA/pilA1	Eikenella corrodens VA1	45.161	100	0.479
comP	Acinetobacter baylyi ADP1	46	100	0.473
pilE	Neisseria elongata subsp. glycolytica ATCC 29315	35.87	100	0.452
pilA	Ralstonia pseudosolanacearum GMI1000	38.415	100	0.432
pilA	Acinetobacter baumannii strain A118	42.282	100	0.432
pilA	Vibrio cholerae strain A1552	39.474	100	0.411
pilA	Vibrio cholerae O1 biovar El Tor strain E7946	39.474	100	0.411
pilA	Vibrio cholerae C6706	39.474	100	0.411
pilA	Pseudomonas aeruginosa PAK	38.816	100	0.404
pilA	Vibrio campbellii strain DS40M4	37.584	100	0.384
pilA/pilAI	Pseudomonas stutzeri DSM 10701	38.849	95.205	0.37