Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | B5D77_RS20525 | Genome accession | NZ_CP020664 |
| Coordinates | 4025401..4026501 (-) | Length | 366 a.a. |
| NCBI ID | WP_008196492.1 | Uniprot ID | A0A2P1UK95 |
| Organism | Microcystis sp. MC19 | ||
| Function | power the assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4020401..4031501
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B5D77_RS26740 | - | 4021180..4021338 (-) | 159 | WP_216644833.1 | hypothetical protein | - |
| B5D77_RS20515 (B5D77_20265) | - | 4021370..4023940 (+) | 2571 | WP_008196496.1 | TIGR03960 family B12-binding radical SAM protein | - |
| B5D77_RS20520 (B5D77_20270) | - | 4023985..4025199 (-) | 1215 | WP_008196494.1 | type II secretion system F family protein | - |
| B5D77_RS25980 | - | 4025132..4025302 (+) | 171 | WP_159036980.1 | hypothetical protein | - |
| B5D77_RS20525 (B5D77_20275) | pilT | 4025401..4026501 (-) | 1101 | WP_008196492.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| B5D77_RS20530 (B5D77_20280) | pilB/pilB1 | 4026654..4028669 (-) | 2016 | WP_008196489.1 | GspE/PulE family protein | Machinery gene |
| B5D77_RS20535 (B5D77_20285) | grpE | 4028910..4029632 (+) | 723 | WP_106909549.1 | nucleotide exchange factor GrpE | - |
| B5D77_RS20540 (B5D77_20290) | - | 4029774..4030433 (-) | 660 | WP_106909550.1 | HAD-IA family hydrolase | - |
Sequence
Protein
Download Length: 366 a.a. Molecular weight: 40241.50 Da Isoelectric Point: 7.3538
>NTDB_id=225349 B5D77_RS20525 WP_008196492.1 4025401..4026501(-) (pilT) [Microcystis sp. MC19]
MELMIEDLMEQLVEMGGSDMHIQSGAPVYFRISGKLSPINEESLTPQDCQKLIFSMLNNTQRKELEQNWELDCSYGVKGL
ARFRVNVYKERGAYAACLRALSSKIPNFEQLNLPAIVRELSERPRGLILVTGQTGSGKTTTLAAILDLINRTRSEHILTV
EDPIEYVFPNIKSLFHQRQKGEDTKSFANALRAALREDPDIILVGEMRDLETISLAITAAETGHLVLGTLHTSSAAGTVD
RIIDVFPANQQAQIRAMLSNSLLAVFSQNLVKKKNPKPGEFGRAMVQEIMVVTPAIANLIREGKAPQIYSAIQTGMKLGM
QTMEQGLANLVVRGVVSLEEAISKSGKPDELQRLVAGASVNAKARI
MELMIEDLMEQLVEMGGSDMHIQSGAPVYFRISGKLSPINEESLTPQDCQKLIFSMLNNTQRKELEQNWELDCSYGVKGL
ARFRVNVYKERGAYAACLRALSSKIPNFEQLNLPAIVRELSERPRGLILVTGQTGSGKTTTLAAILDLINRTRSEHILTV
EDPIEYVFPNIKSLFHQRQKGEDTKSFANALRAALREDPDIILVGEMRDLETISLAITAAETGHLVLGTLHTSSAAGTVD
RIIDVFPANQQAQIRAMLSNSLLAVFSQNLVKKKNPKPGEFGRAMVQEIMVVTPAIANLIREGKAPQIYSAIQTGMKLGM
QTMEQGLANLVVRGVVSLEEAISKSGKPDELQRLVAGASVNAKARI
Nucleotide
Download Length: 1101 bp
>NTDB_id=225349 B5D77_RS20525 WP_008196492.1 4025401..4026501(-) (pilT) [Microcystis sp. MC19]
ATGGAATTAATGATCGAAGATTTAATGGAACAATTGGTCGAGATGGGCGGTTCCGATATGCACATTCAGTCCGGGGCGCC
GGTCTATTTTCGTATTAGTGGCAAACTGTCCCCGATTAATGAAGAATCTTTAACCCCGCAAGATTGTCAGAAATTGATTT
TTAGTATGCTCAATAATACCCAAAGAAAAGAGTTAGAGCAGAATTGGGAATTAGACTGTTCCTACGGGGTGAAGGGATTG
GCAAGATTTAGGGTCAATGTTTATAAAGAAAGGGGGGCTTATGCCGCTTGTTTAAGGGCTTTGTCCTCTAAAATTCCTAA
CTTTGAACAATTAAATTTACCAGCAATAGTCCGAGAATTATCGGAAAGACCGAGGGGATTAATTCTCGTAACTGGGCAAA
CAGGTTCAGGTAAAACTACCACTTTAGCGGCAATTTTAGACTTAATTAATAGAACCAGATCTGAACATATTTTAACTGTA
GAAGACCCAATTGAATACGTTTTTCCTAATATAAAAAGCCTGTTTCACCAACGACAAAAAGGAGAAGATACCAAGAGTTT
TGCTAACGCTTTAAGGGCAGCTTTGCGGGAAGATCCTGATATTATCCTTGTGGGAGAAATGCGGGATTTAGAAACAATTA
GTTTGGCGATCACGGCGGCAGAAACCGGTCACTTAGTCTTGGGAACCCTACACACTAGCTCGGCAGCGGGAACAGTGGAT
CGGATTATTGACGTTTTCCCCGCTAACCAACAGGCACAAATTCGCGCCATGTTATCCAACTCTTTACTAGCAGTTTTTAG
TCAAAACCTAGTCAAGAAAAAAAATCCTAAACCGGGGGAATTTGGCCGGGCAATGGTACAGGAAATCATGGTGGTAACTC
CAGCGATTGCCAACCTAATTCGCGAAGGAAAAGCCCCCCAAATCTACTCAGCCATTCAAACGGGAATGAAGTTAGGAATG
CAAACCATGGAACAGGGATTAGCTAATTTAGTTGTTAGGGGTGTTGTCTCTTTGGAAGAGGCAATTTCTAAAAGTGGTAA
ACCCGATGAATTACAACGTCTGGTCGCTGGGGCCAGCGTTAACGCTAAAGCCCGGATTTAA
ATGGAATTAATGATCGAAGATTTAATGGAACAATTGGTCGAGATGGGCGGTTCCGATATGCACATTCAGTCCGGGGCGCC
GGTCTATTTTCGTATTAGTGGCAAACTGTCCCCGATTAATGAAGAATCTTTAACCCCGCAAGATTGTCAGAAATTGATTT
TTAGTATGCTCAATAATACCCAAAGAAAAGAGTTAGAGCAGAATTGGGAATTAGACTGTTCCTACGGGGTGAAGGGATTG
GCAAGATTTAGGGTCAATGTTTATAAAGAAAGGGGGGCTTATGCCGCTTGTTTAAGGGCTTTGTCCTCTAAAATTCCTAA
CTTTGAACAATTAAATTTACCAGCAATAGTCCGAGAATTATCGGAAAGACCGAGGGGATTAATTCTCGTAACTGGGCAAA
CAGGTTCAGGTAAAACTACCACTTTAGCGGCAATTTTAGACTTAATTAATAGAACCAGATCTGAACATATTTTAACTGTA
GAAGACCCAATTGAATACGTTTTTCCTAATATAAAAAGCCTGTTTCACCAACGACAAAAAGGAGAAGATACCAAGAGTTT
TGCTAACGCTTTAAGGGCAGCTTTGCGGGAAGATCCTGATATTATCCTTGTGGGAGAAATGCGGGATTTAGAAACAATTA
GTTTGGCGATCACGGCGGCAGAAACCGGTCACTTAGTCTTGGGAACCCTACACACTAGCTCGGCAGCGGGAACAGTGGAT
CGGATTATTGACGTTTTCCCCGCTAACCAACAGGCACAAATTCGCGCCATGTTATCCAACTCTTTACTAGCAGTTTTTAG
TCAAAACCTAGTCAAGAAAAAAAATCCTAAACCGGGGGAATTTGGCCGGGCAATGGTACAGGAAATCATGGTGGTAACTC
CAGCGATTGCCAACCTAATTCGCGAAGGAAAAGCCCCCCAAATCTACTCAGCCATTCAAACGGGAATGAAGTTAGGAATG
CAAACCATGGAACAGGGATTAGCTAATTTAGTTGTTAGGGGTGTTGTCTCTTTGGAAGAGGCAATTTCTAAAAGTGGTAA
ACCCGATGAATTACAACGTCTGGTCGCTGGGGCCAGCGTTAACGCTAAAGCCCGGATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Legionella pneumophila strain ERS1305867 |
52.464 |
94.262 |
0.495 |
| pilT | Legionella pneumophila strain Lp02 |
52.464 |
94.262 |
0.495 |
| pilT | Acinetobacter baumannii D1279779 |
51.297 |
94.809 |
0.486 |
| pilT | Acinetobacter baumannii strain A118 |
51.297 |
94.809 |
0.486 |
| pilT | Acinetobacter nosocomialis M2 |
51.297 |
94.809 |
0.486 |
| pilT | Pseudomonas aeruginosa PAK |
51.009 |
94.809 |
0.484 |
| pilT | Acinetobacter baylyi ADP1 |
50.72 |
94.809 |
0.481 |
| pilT | Pseudomonas stutzeri DSM 10701 |
50.144 |
94.809 |
0.475 |
| pilT | Vibrio cholerae strain A1552 |
51.176 |
92.896 |
0.475 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
51.176 |
92.896 |
0.475 |
| pilT | Neisseria meningitidis 8013 |
49.853 |
92.623 |
0.462 |
| pilT | Neisseria gonorrhoeae MS11 |
49.558 |
92.623 |
0.459 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
46.197 |
96.995 |
0.448 |
| pilU | Pseudomonas stutzeri DSM 10701 |
38.177 |
95.902 |
0.366 |