Detailed information NTG0222896

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: A6J31_RS08675
• Genome accession: NZ_CP020431
• Coordinates: 1686572..1686886 (-)
• Length: 104 a.a.
• NCBI ID: WP_037611125.1
• Uniprot ID: -
• Organism: Streptococcus sp. FDAARGOS_192
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1681572..1691886

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J31_RS08635 (A6J31_08570)	-	1681859..1682515 (-)	657	WP_014632546.1	CPBP family intramembrane glutamic endopeptidase	-
A6J31_RS08640 (A6J31_08575)	-	1682527..1682724 (-)	198	WP_002885716.1	helix-turn-helix transcriptional regulator	-
A6J31_RS08645 (A6J31_08580)	-	1682952..1684145 (-)	1194	WP_002885831.1	acetate kinase	-
A6J31_RS08650 (A6J31_08585)	comYH	1684202..1685158 (-)	957	WP_080610972.1	class I SAM-dependent methyltransferase	Machinery gene
A6J31_RS08655 (A6J31_08590)	comGG	1685203..1685520 (-)	318	WP_021144683.1	competence type IV pilus minor pilin ComGG	-
A6J31_RS08660 (A6J31_08595)	comYF	1685498..1685935 (-)	438	WP_002887014.1	competence type IV pilus minor pilin ComGF	Machinery gene
A6J31_RS08665 (A6J31_08600)	comGE	1685922..1686152 (-)	231	WP_002887015.1	competence type IV pilus minor pilin ComGE	-
A6J31_RS08670 (A6J31_08605)	comYD	1686184..1686612 (-)	429	WP_263970040.1	competence type IV pilus minor pilin ComGD	Machinery gene
A6J31_RS08675 (A6J31_08610)	comYC	1686572..1686886 (-)	315	WP_037611125.1	competence type IV pilus major pilin ComGC	Machinery gene
A6J31_RS08680 (A6J31_08615)	comYB	1686895..1687995 (-)	1101	WP_142390728.1	competence type IV pilus assembly protein ComGB	Machinery gene
A6J31_RS08685 (A6J31_08620)	comYA	1687877..1688818 (-)	942	WP_080610975.1	competence type IV pilus ATPase ComGA	Machinery gene
A6J31_RS08690 (A6J31_08625)	-	1688898..1689260 (-)	363	WP_002887019.1	DUF1033 family protein	-

Sequence

Protein

• Length: 104 a.a.
• Molecular weight: 11428.31 Da
• Isoelectric Point: 9.7150

>NTDB_id=222896 A6J31_RS08675 WP_037611125.1 1686572..1686886(-) (comYC) [Streptococcus sp. FDAARGOS_192]
MKKLNAVKLRAFTLIEMLVVLLIISILLLLFVPNLSKQKDSVKETGNAAVVKVVDSQAELYEMKNNKTASLAALVSEGQI
TQKQADSYNDYYAKHGGESRSVAN

Nucleotide

• Length: 315 bp

>NTDB_id=222896 A6J31_RS08675 WP_037611125.1 1686572..1686886(-) (comYC) [Streptococcus sp. FDAARGOS_192]
TTGAAAAAATTGAATGCCGTTAAATTACGAGCTTTTACACTGATTGAAATGCTGGTCGTGCTTCTCATTATCAGTATTCT
CCTTTTGCTCTTTGTACCTAACTTGAGCAAGCAGAAGGATTCTGTTAAAGAGACTGGAAATGCGGCTGTGGTCAAGGTCG
TAGATTCTCAAGCAGAACTTTATGAAATGAAGAATAACAAGACAGCTAGCTTAGCCGCTCTTGTTTCAGAAGGTCAAATC
ACGCAAAAACAGGCAGATTCATACAATGATTACTATGCGAAACATGGTGGCGAAAGCCGCTCAGTGGCCAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (10-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus mutans UA140	70.192	100	0.702
comYC	Streptococcus mutans UA159	70.192	100	0.702
comYC	Streptococcus gordonii str. Challis substr. CH1	64.762	100	0.654
comGC/cglC	Streptococcus mitis SK321	63.636	95.192	0.606
comGC/cglC	Streptococcus mitis NCTC 12261	59.406	97.115	0.577
comGC	Lactococcus lactis subsp. cremoris KW2	58.416	97.115	0.567
comGC/cglC	Streptococcus pneumoniae R6	59.596	95.192	0.567
comGC/cglC	Streptococcus pneumoniae Rx1	59.596	95.192	0.567
comGC/cglC	Streptococcus pneumoniae TIGR4	59.596	95.192	0.567
comGC/cglC	Streptococcus pneumoniae D39	59.596	95.192	0.567
comYC	Streptococcus suis isolate S10	61.364	84.615	0.519
comGC	Staphylococcus aureus MW2	50	75	0.375
comGC	Staphylococcus aureus N315	50	75	0.375