Detailed information NTG0020323

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: SMA_0094
• Genome accession: HE613569
• Coordinates: 103576..103869 (+)
• Length: 97 a.a.
• NCBI ID: CCF01385.1
• Uniprot ID: -
• Organism: Streptococcus macedonicus ACA-DC 198
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 98576..108869

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SMA_0091	-	101229..101558 (+)	330	CCF01382.1	DNA binding protein	-
SMA_0092	comYA	101668..102609 (+)	942	CCF01383.1	Late competence protein ComGA, access of DNA to ComEA	Machinery gene
SMA_0093	comYB	102491..103576 (+)	1086	CCF01384.1	Late competence protein ComGB, access of DNA to ComEA	Machinery gene
SMA_0094	comYC	103576..103869 (+)	294	CCF01385.1	Late competence protein ComGC, access of DNA to ComEA	Machinery gene
SMA_0095	comYD	103853..104284 (+)	432	CCF01386.1	Late competence protein ComGD, access of DNA to ComEA	Machinery gene
SMA_0096	comGE	104289..104531 (+)	243	CCF01387.1	Late competence protein ComGE	-
SMA_0097	comYF	104485..104952 (+)	468	CCF01388.1	Late competence protein ComGF, access of DNA to ComEA	Machinery gene
SMA_0098	comYG	104924..105229 (+)	306	CCF01389.1	Late competence protein ComGG	Machinery gene
SMA_0099	comYH	105311..106267 (+)	957	CCF01390.1	Adenine-specific methyltransferase	Machinery gene
SMA_0100	ackA	106320..107519 (+)	1200	CCF01391.1	Acetate kinase	-
SMA_0101	-	107681..107881 (+)	201	CCF01392.1	Transcriptional regulator, Cro/CI family	-
SMA_0102	-	107891..108100 (+)	210	CCF01393.1	Hypothetical protein	-
SMA_0103	-	108113..108565 (+)	453	CCF01394.1	Hypothetical protein	-

Sequence

Protein

• Length: 97 a.a.
• Molecular weight: 11055.20 Da
• Isoelectric Point: 9.4199

>NTDB_id=20323 SMA_0094 CCF01385.1 103576..103869(+) (comYC) [Streptococcus macedonicus ACA-DC 198]
MKKFWKKLCQKTVKGFTLVEMLIVLLIISVLMLLFVPNLSKQKDVVREKGDAAVVKVVESQMDLYEMKTGDKPTVDDLVE
VGYITSEQAKTYNEAKK

Nucleotide

• Length: 294 bp

>NTDB_id=20323 SMA_0094 CCF01385.1 103576..103869(+) (comYC) [Streptococcus macedonicus ACA-DC 198]
ATGAAAAAGTTTTGGAAAAAATTATGTCAGAAAACGGTAAAAGGGTTCACACTTGTGGAGATGTTGATTGTGCTTCTTAT
TATCAGTGTTTTAATGTTGCTTTTTGTACCGAATTTGAGTAAGCAAAAGGATGTTGTTCGTGAAAAAGGCGATGCTGCTG
TTGTGAAAGTGGTAGAGAGCCAAATGGATTTGTACGAAATGAAAACGGGAGACAAACCGACTGTTGATGATTTAGTTGAA
GTTGGCTACATCACTTCTGAACAAGCAAAAACTTACAATGAAGCTAAAAAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (13-34)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus suis isolate S10	67.391	94.845	0.639
comYC	Streptococcus gordonii str. Challis substr. CH1	64.773	90.722	0.588
comGC/cglC	Streptococcus mitis SK321	60.638	96.907	0.588
comGC/cglC	Streptococcus pneumoniae D39	59.574	96.907	0.577
comGC/cglC	Streptococcus pneumoniae R6	59.574	96.907	0.577
comGC/cglC	Streptococcus pneumoniae TIGR4	59.574	96.907	0.577
comGC/cglC	Streptococcus pneumoniae Rx1	59.574	96.907	0.577
comGC/cglC	Streptococcus mitis NCTC 12261	59.574	96.907	0.577
comGC	Lactococcus lactis subsp. cremoris KW2	57.778	92.784	0.536
comYC	Streptococcus mutans UA140	58.427	91.753	0.536
comYC	Streptococcus mutans UA159	58.427	91.753	0.536
comGC	Staphylococcus aureus MW2	42.697	91.753	0.392
comGC	Staphylococcus aureus N315	42.697	91.753	0.392