Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | CH92_RS16670 | Genome accession | NZ_CP007441 |
| Coordinates | 3670216..3670683 (+) | Length | 155 a.a. |
| NCBI ID | WP_025242902.1 | Uniprot ID | W8RAN1 |
| Organism | Stutzerimonas stutzeri strain 28a24 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3665216..3675683
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CH92_RS16655 (CH92_17010) | pilD | 3666196..3667062 (-) | 867 | WP_025242899.1 | A24 family peptidase | Machinery gene |
| CH92_RS16660 (CH92_17015) | pilC | 3667065..3668282 (-) | 1218 | WP_025242900.1 | type II secretion system F family protein | Machinery gene |
| CH92_RS16665 (CH92_17020) | pilB | 3668284..3669990 (-) | 1707 | WP_025242901.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| CH92_RS16670 (CH92_17025) | pilE | 3670216..3670683 (+) | 468 | WP_025242902.1 | pilin | Machinery gene |
| CH92_RS16675 (CH92_17030) | - | 3671881..3672399 (+) | 519 | WP_038623084.1 | transposase | - |
| CH92_RS16680 (CH92_17040) | - | 3672689..3673126 (+) | 438 | WP_025242903.1 | YtoQ family protein | - |
| CH92_RS16685 (CH92_17045) | cysN | 3673244..3675142 (-) | 1899 | WP_025242904.1 | sulfate adenylyltransferase subunit CysN | - |
Sequence
Protein
Download Length: 155 a.a. Molecular weight: 15916.23 Da Isoelectric Point: 3.9929
>NTDB_id=119363 CH92_RS16670 WP_025242902.1 3670216..3670683(+) (pilE) [Stutzerimonas stutzeri strain 28a24]
MKAQMQKGFTLIELMIVVAIIGILAAVALPAYQDYTVRAKVSEGMIAASALKIGVTDVFADNGIAGVAAYSTEIAADQDN
LTTDLISAVAVSATTGAISITMAGIPQLGTNNVLAFVPEINDAAIANDNSTGSITWDCSSATTTIDSKFLPANCR
MKAQMQKGFTLIELMIVVAIIGILAAVALPAYQDYTVRAKVSEGMIAASALKIGVTDVFADNGIAGVAAYSTEIAADQDN
LTTDLISAVAVSATTGAISITMAGIPQLGTNNVLAFVPEINDAAIANDNSTGSITWDCSSATTTIDSKFLPANCR
Nucleotide
Download Length: 468 bp
>NTDB_id=119363 CH92_RS16670 WP_025242902.1 3670216..3670683(+) (pilE) [Stutzerimonas stutzeri strain 28a24]
ATGAAAGCTCAGATGCAAAAAGGTTTTACCCTGATTGAACTGATGATCGTCGTGGCGATCATTGGTATTTTGGCTGCGGT
GGCTCTGCCGGCGTACCAGGATTACACGGTACGGGCGAAAGTCTCCGAAGGCATGATCGCTGCAAGCGCACTCAAAATCG
GCGTCACCGATGTGTTTGCTGATAACGGCATCGCAGGCGTTGCAGCTTACTCTACGGAAATTGCGGCAGATCAAGATAAT
CTGACTACCGACTTGATATCTGCTGTAGCAGTTAGCGCCACTACCGGCGCTATTTCGATCACTATGGCTGGGATACCGCA
GCTTGGTACCAACAACGTATTGGCATTCGTTCCCGAGATCAACGACGCTGCAATTGCCAACGACAATTCTACCGGTTCGA
TCACTTGGGATTGCTCGTCTGCTACTACTACAATTGATAGCAAATTCCTCCCAGCGAACTGCCGCTGA
ATGAAAGCTCAGATGCAAAAAGGTTTTACCCTGATTGAACTGATGATCGTCGTGGCGATCATTGGTATTTTGGCTGCGGT
GGCTCTGCCGGCGTACCAGGATTACACGGTACGGGCGAAAGTCTCCGAAGGCATGATCGCTGCAAGCGCACTCAAAATCG
GCGTCACCGATGTGTTTGCTGATAACGGCATCGCAGGCGTTGCAGCTTACTCTACGGAAATTGCGGCAGATCAAGATAAT
CTGACTACCGACTTGATATCTGCTGTAGCAGTTAGCGCCACTACCGGCGCTATTTCGATCACTATGGCTGGGATACCGCA
GCTTGGTACCAACAACGTATTGGCATTCGTTCCCGAGATCAACGACGCTGCAATTGCCAACGACAATTCTACCGGTTCGA
TCACTTGGGATTGCTCGTCTGCTACTACTACAATTGATAGCAAATTCCTCCCAGCGAACTGCCGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
41.538 |
100 |
0.523 |
| comP | Acinetobacter baylyi ADP1 |
42.767 |
100 |
0.439 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
39.08 |
100 |
0.439 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
38.012 |
100 |
0.419 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
38.415 |
100 |
0.406 |
| pilA/pilA1 | Eikenella corrodens VA1 |
38.182 |
100 |
0.406 |
| pilE | Neisseria gonorrhoeae MS11 |
36.97 |
100 |
0.394 |
| pilA2 | Legionella pneumophila str. Paris |
39.073 |
97.419 |
0.381 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
39.073 |
97.419 |
0.381 |
| pilA | Vibrio cholerae strain A1552 |
36.25 |
100 |
0.374 |
| pilA | Vibrio cholerae C6706 |
36.25 |
100 |
0.374 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
36.25 |
100 |
0.374 |