Detailed information
Bioinformatically predicted
Overview
| Name | comGC/cglC | Type | Machinery gene |
| Locus tag | ACLV7D_RS01090 | Genome accession | NZ_OZ217345 |
| Coordinates | 210824..211147 (+) | Length | 107 a.a. |
| NCBI ID | WP_112445359.1 | Uniprot ID | - |
| Organism | Streptococcus mitis isolate S. mitis F22 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 205824..216147
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLV7D_RS01065 (SMIF22_02060) | nagA | 205952..207103 (+) | 1152 | WP_173234892.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
| ACLV7D_RS01070 (SMIF22_02070) | - | 207266..208324 (+) | 1059 | WP_000649461.1 | zinc-dependent alcohol dehydrogenase family protein | - |
| ACLV7D_RS01075 (SMIF22_02080) | - | 208475..208840 (+) | 366 | WP_045606653.1 | DUF1033 family protein | - |
| ACLV7D_RS01080 (SMIF22_02090) | comGA/cglA/cilD | 208917..209858 (+) | 942 | WP_164226419.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACLV7D_RS01085 (SMIF22_02100) | comGB/cglB | 209806..210822 (+) | 1017 | WP_112445357.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ACLV7D_RS01090 (SMIF22_02110) | comGC/cglC | 210824..211147 (+) | 324 | WP_112445359.1 | comG operon protein ComGC | Machinery gene |
| ACLV7D_RS01095 (SMIF22_02120) | comGD/cglD | 211110..211544 (+) | 435 | WP_164226418.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ACLV7D_RS01100 (SMIF22_02130) | comGE/cglE | 211507..211809 (+) | 303 | WP_191994109.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| ACLV7D_RS01105 (SMIF22_02140) | comGF/cglF | 211772..212233 (+) | 462 | WP_112445365.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ACLV7D_RS01110 (SMIF22_02150) | comGG/cglG | 212211..212624 (+) | 414 | WP_112445367.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| ACLV7D_RS01115 (SMIF22_02160) | - | 212657..213244 (+) | 588 | WP_164226417.1 | class I SAM-dependent methyltransferase | - |
| ACLV7D_RS01120 (SMIF22_02170) | comYH | 213305..214258 (+) | 954 | WP_218764767.1 | class I SAM-dependent methyltransferase | Machinery gene |
| ACLV7D_RS01125 (SMIF22_02180) | - | 214308..215498 (+) | 1191 | WP_218764766.1 | acetate kinase | - |
| ACLV7D_RS01130 (SMIF22_02190) | rnpA | 215646..216017 (+) | 372 | WP_112445373.1 | ribonuclease P protein component | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 11986.14 Da Isoelectric Point: 9.9097
>NTDB_id=1170333 ACLV7D_RS01090 WP_112445359.1 210824..211147(+) (comGC/cglC) [Streptococcus mitis isolate S. mitis F22]
MKKMMTFLKKVKVKAFTLVEMLVVLLIISVLLLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLDKNEDASLSKLQA
DGRITEEQAKAYKEYHAKQNTSQTVAD
MKKMMTFLKKVKVKAFTLVEMLVVLLIISVLLLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLDKNEDASLSKLQA
DGRITEEQAKAYKEYHAKQNTSQTVAD
Nucleotide
Download Length: 324 bp
>NTDB_id=1170333 ACLV7D_RS01090 WP_112445359.1 210824..211147(+) (comGC/cglC) [Streptococcus mitis isolate S. mitis F22]
ATGAAAAAAATGATGACATTCTTGAAAAAAGTGAAAGTGAAGGCTTTCACACTTGTGGAAATGTTGGTGGTCTTGCTCAT
CATCAGCGTGCTTCTCTTGCTCTTTGTACCTAATCTGACCAAACAAAAAGAAGCAGTCAACGACAAAGGAAAAGCTGCTG
TTGTTAAGGTGGTGGAAAGCCAGGCAGAGCTTTATAGCTTGGATAAAAATGAAGATGCTAGCCTAAGCAAGTTACAAGCA
GATGGGCGAATCACAGAAGAACAGGCTAAAGCTTATAAAGAATACCATGCTAAACAAAATACCAGTCAAACCGTTGCAGA
TTAA
ATGAAAAAAATGATGACATTCTTGAAAAAAGTGAAAGTGAAGGCTTTCACACTTGTGGAAATGTTGGTGGTCTTGCTCAT
CATCAGCGTGCTTCTCTTGCTCTTTGTACCTAATCTGACCAAACAAAAAGAAGCAGTCAACGACAAAGGAAAAGCTGCTG
TTGTTAAGGTGGTGGAAAGCCAGGCAGAGCTTTATAGCTTGGATAAAAATGAAGATGCTAGCCTAAGCAAGTTACAAGCA
GATGGGCGAATCACAGAAGAACAGGCTAAAGCTTATAAAGAATACCATGCTAAACAAAATACCAGTCAAACCGTTGCAGA
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC/cglC | Streptococcus mitis NCTC 12261 |
99.065 |
100 |
0.991 |
| comGC/cglC | Streptococcus mitis SK321 |
92.233 |
96.262 |
0.888 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
91.176 |
95.327 |
0.869 |
| comGC/cglC | Streptococcus pneumoniae D39 |
91.176 |
95.327 |
0.869 |
| comGC/cglC | Streptococcus pneumoniae R6 |
91.176 |
95.327 |
0.869 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
89.32 |
96.262 |
0.86 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
69.524 |
98.131 |
0.682 |
| comYC | Streptococcus mutans UA140 |
69.474 |
88.785 |
0.617 |
| comYC | Streptococcus mutans UA159 |
69.474 |
88.785 |
0.617 |
| comYC | Streptococcus suis isolate S10 |
67.045 |
82.243 |
0.551 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
55.67 |
90.654 |
0.505 |
| comGC | Staphylococcus aureus MW2 |
51.163 |
80.374 |
0.411 |
| comGC | Staphylococcus aureus N315 |
51.163 |
80.374 |
0.411 |