Detailed information
Bioinformatically predicted
Overview
| Name | comGC/cglC | Type | Machinery gene |
| Locus tag | U8955_RS01405 | Genome accession | NZ_OY769914 |
| Coordinates | 248059..248382 (+) | Length | 107 a.a. |
| NCBI ID | WP_038804052.1 | Uniprot ID | - |
| Organism | Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 243059..253382
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U8955_RS01385 (SDENT7746_01405) | nagA | 244417..245568 (+) | 1152 | WP_038804054.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
| U8955_RS01390 (SDENT7746_01410) | - | 245717..246082 (+) | 366 | WP_000286399.1 | DUF1033 family protein | - |
| U8955_RS01395 (SDENT7746_01415) | comGA/cglA/cilD | 246152..247093 (+) | 942 | WP_038804053.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| U8955_RS01400 (SDENT7746_01420) | comGB/cglB | 247041..248057 (+) | 1017 | WP_068981894.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| U8955_RS01405 (SDENT7746_01425) | comGC/cglC | 248059..248382 (+) | 324 | WP_038804052.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| U8955_RS01410 (SDENT7746_01430) | comGD/cglD | 248345..248779 (+) | 435 | WP_038804051.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| U8955_RS01415 (SDENT7746_01435) | comGE/cglE | 248742..249044 (+) | 303 | WP_265101009.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| U8955_RS01420 (SDENT7746_01440) | comGF/cglF | 249007..249468 (+) | 462 | WP_038804049.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| U8955_RS01425 (SDENT7746_01445) | comGG | 249446..249858 (+) | 413 | Protein_260 | competence type IV pilus minor pilin ComGG | - |
| U8955_RS01430 (SDENT7746_01450) | - | 249891..250481 (+) | 591 | WP_038804047.1 | class I SAM-dependent methyltransferase | - |
| U8955_RS01435 (SDENT7746_01455) | comYH | 250540..251493 (+) | 954 | WP_038804046.1 | class I SAM-dependent methyltransferase | Machinery gene |
| U8955_RS01440 (SDENT7746_01460) | - | 251543..252733 (+) | 1191 | WP_038804045.1 | acetate kinase | - |
| U8955_RS01445 (SDENT7746_01465) | rnpA | 252893..253264 (+) | 372 | WP_000748124.1 | ribonuclease P protein component | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 11833.98 Da Isoelectric Point: 10.0527
>NTDB_id=1161693 U8955_RS01405 WP_038804052.1 248059..248382(+) (comGC/cglC) [Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746]
MKKLMIKLKKAKAQAFTLVEMLVVLLIISVLLLLFVPNLTKQKDAVDDKGKAAVVKVVESQAELYSLDKNEDASLSKLQA
DGRITAEQAKAYKDYHAKQKTSQTVAD
MKKLMIKLKKAKAQAFTLVEMLVVLLIISVLLLLFVPNLTKQKDAVDDKGKAAVVKVVESQAELYSLDKNEDASLSKLQA
DGRITAEQAKAYKDYHAKQKTSQTVAD
Nucleotide
Download Length: 324 bp
>NTDB_id=1161693 U8955_RS01405 WP_038804052.1 248059..248382(+) (comGC/cglC) [Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746]
ATGAAAAAACTCATGATAAAACTAAAAAAAGCCAAGGCGCAAGCCTTCACTCTGGTAGAAATGTTAGTCGTCTTGCTCAT
CATCAGCGTACTTCTCTTGCTCTTTGTACCTAATTTGACCAAGCAAAAGGATGCCGTTGATGACAAAGGAAAAGCTGCTG
TTGTTAAGGTGGTGGAAAGTCAGGCAGAACTCTATAGTCTGGACAAGAATGAAGATGCGAGTCTAAGCAAATTGCAGGCA
GACGGCCGTATCACAGCTGAGCAAGCCAAGGCTTATAAAGACTACCATGCAAAACAAAAAACAAGTCAAACTGTTGCGGA
TTAA
ATGAAAAAACTCATGATAAAACTAAAAAAAGCCAAGGCGCAAGCCTTCACTCTGGTAGAAATGTTAGTCGTCTTGCTCAT
CATCAGCGTACTTCTCTTGCTCTTTGTACCTAATTTGACCAAGCAAAAGGATGCCGTTGATGACAAAGGAAAAGCTGCTG
TTGTTAAGGTGGTGGAAAGTCAGGCAGAACTCTATAGTCTGGACAAGAATGAAGATGCGAGTCTAAGCAAATTGCAGGCA
GACGGCCGTATCACAGCTGAGCAAGCCAAGGCTTATAAAGACTACCATGCAAAACAAAAAACAAGTCAAACTGTTGCGGA
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC/cglC | Streptococcus mitis NCTC 12261 |
90.654 |
100 |
0.907 |
| comGC/cglC | Streptococcus mitis SK321 |
87.879 |
92.523 |
0.813 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
85.859 |
92.523 |
0.794 |
| comGC/cglC | Streptococcus pneumoniae D39 |
85.859 |
92.523 |
0.794 |
| comGC/cglC | Streptococcus pneumoniae R6 |
85.859 |
92.523 |
0.794 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
84.848 |
92.523 |
0.785 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
66.667 |
98.131 |
0.654 |
| comYC | Streptococcus mutans UA140 |
69.072 |
90.654 |
0.626 |
| comYC | Streptococcus mutans UA159 |
69.072 |
90.654 |
0.626 |
| comYC | Streptococcus suis isolate S10 |
65.909 |
82.243 |
0.542 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
55.882 |
95.327 |
0.533 |
| comGC | Staphylococcus aureus MW2 |
51.852 |
75.701 |
0.393 |
| comGC | Staphylococcus aureus N315 |
51.852 |
75.701 |
0.393 |