Detailed information NTG1161694

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: U8955_RS01410
• Genome accession: NZ_OY769914
• Coordinates: 248345..248779 (+)
• Length: 144 a.a.
• NCBI ID: WP_038804051.1
• Uniprot ID: -
• Organism: Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 243345..253779

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
U8955_RS01385 (SDENT7746_01405)	nagA	244417..245568 (+)	1152	WP_038804054.1	N-acetylglucosamine-6-phosphate deacetylase	-
U8955_RS01390 (SDENT7746_01410)	-	245717..246082 (+)	366	WP_000286399.1	DUF1033 family protein	-
U8955_RS01395 (SDENT7746_01415)	comGA/cglA/cilD	246152..247093 (+)	942	WP_038804053.1	competence type IV pilus ATPase ComGA	Machinery gene
U8955_RS01400 (SDENT7746_01420)	comGB/cglB	247041..248057 (+)	1017	WP_068981894.1	competence type IV pilus assembly protein ComGB	Machinery gene
U8955_RS01405 (SDENT7746_01425)	comGC/cglC	248059..248382 (+)	324	WP_038804052.1	competence type IV pilus major pilin ComGC	Machinery gene
U8955_RS01410 (SDENT7746_01430)	comGD/cglD	248345..248779 (+)	435	WP_038804051.1	competence type IV pilus minor pilin ComGD	Machinery gene
U8955_RS01415 (SDENT7746_01435)	comGE/cglE	248742..249044 (+)	303	WP_265101009.1	competence type IV pilus minor pilin ComGE	Machinery gene
U8955_RS01420 (SDENT7746_01440)	comGF/cglF	249007..249468 (+)	462	WP_038804049.1	competence type IV pilus minor pilin ComGF	Machinery gene
U8955_RS01425 (SDENT7746_01445)	comGG	249446..249858 (+)	413	Protein_260	competence type IV pilus minor pilin ComGG	-
U8955_RS01430 (SDENT7746_01450)	-	249891..250481 (+)	591	WP_038804047.1	class I SAM-dependent methyltransferase	-
U8955_RS01435 (SDENT7746_01455)	comYH	250540..251493 (+)	954	WP_038804046.1	class I SAM-dependent methyltransferase	Machinery gene
U8955_RS01440 (SDENT7746_01460)	-	251543..252733 (+)	1191	WP_038804045.1	acetate kinase	-
U8955_RS01445 (SDENT7746_01465)	rnpA	252893..253264 (+)	372	WP_000748124.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15997.57 Da
• Isoelectric Point: 10.8366

>NTDB_id=1161694 U8955_RS01410 WP_038804051.1 248345..248779(+) (comGD/cglD) [Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746]
MQNKKQVKLLRIKAFTMLESLLVLGLVSILALGLSGSVQSSFAAVEEQIFFMEFEELYRETQKRSLASQQKTSLNLDGQT
INNGSQKLTVPKGIQGPSGQSIIFDRAGGNRSLAKVEFQTRKGAISYRLYLGNGKIKRIKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=1161694 U8955_RS01410 WP_038804051.1 248345..248779(+) (comGD/cglD) [Streptococcus oralis subsp. dentisani isolate Streptococcus dentisani 7746]
ATGCAAAACAAAAAACAAGTCAAACTGTTGCGGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGGCTTGT
GAGTATCCTTGCTTTGGGCTTGTCCGGCTCAGTCCAGTCCAGTTTTGCAGCGGTGGAAGAACAGATTTTCTTTATGGAAT
TTGAAGAACTCTATCGGGAAACTCAAAAACGTAGTCTAGCAAGTCAGCAAAAGACCAGCTTAAACTTAGATGGGCAGACA
ATCAACAATGGCAGTCAAAAATTGACCGTTCCTAAAGGAATTCAGGGACCATCAGGACAAAGCATTATATTTGACCGAGC
TGGTGGAAATAGATCTCTGGCTAAGGTTGAATTTCAGACCAGAAAAGGAGCAATCAGTTATCGATTATATTTAGGAAATG
GAAAAATTAAACGCATTAAGGAAACTAAAAATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	88.889	100	0.889
comGD/cglD	Streptococcus pneumoniae Rx1	91.729	92.361	0.847
comGD/cglD	Streptococcus pneumoniae D39	91.729	92.361	0.847
comGD/cglD	Streptococcus pneumoniae R6	91.729	92.361	0.847
comGD/cglD	Streptococcus mitis SK321	91.729	92.361	0.847
comGD/cglD	Streptococcus pneumoniae TIGR4	90.977	92.361	0.84
comYD	Streptococcus gordonii str. Challis substr. CH1	54.264	89.583	0.486
comYD	Streptococcus mutans UA140	45.736	89.583	0.41
comYD	Streptococcus mutans UA159	45.736	89.583	0.41