Detailed information NTG1151540

Bioinformatically predicted

Overview

• Name: pilE
• Type: Machinery gene
• Locus tag: LG374_RS08160
• Genome accession: NZ_OU745373
• Coordinates: 1669321..1669761 (+)
• Length: 146 a.a.
• NCBI ID: WP_304518576.1
• Uniprot ID: -
• Organism: Cardiobacterium sp. Marseille-Q4385
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1664321..1674761

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LG374_RS08120	rpsO	1665794..1666060 (-)	267	WP_006985646.1	30S ribosomal protein S15	-
LG374_RS08125	-	1666294..1667727 (+)	1434	WP_225757224.1	DASS family sodium-coupled anion symporter	-
LG374_RS08130	-	1667724..1668095 (+)	372	WP_225757225.1	hypothetical protein	-
LG374_RS08140	pilE	1668116..1668559 (+)	444	WP_304518575.1	pilin	Machinery gene
LG374_RS08150	-	1668604..1669110 (+)	507	WP_370639309.1	pilin	-
LG374_RS08160	pilE	1669321..1669761 (+)	441	WP_304518576.1	pilin	Machinery gene
LG374_RS08165	-	1669948..1673763 (+)	3816	WP_225757226.1	fused MFS/spermidine synthase	-
LG374_RS08170	tfpZ	1673840..1674577 (+)	738	WP_225757227.1	TfpX/TfpZ family type IV pilin accessory protein	-

Sequence

Protein

• Length: 146 a.a.
• Molecular weight: 15330.40 Da
• Isoelectric Point: 8.9802

>NTDB_id=1151540 LG374_RS08160 WP_304518576.1 1669321..1669761(+) (pilE) [Cardiobacterium sp. Marseille-Q4385]
MKNYQKGFTLIELMIVIAIIGILAAIALPSYQDYLARSQMTEGLNLAGGQKSSVTEYRSNKGAWPSSNTEAGIPAPSDIA
GKYVASVTVSASGSNGNIRALMKSSGVSARISGAELILQGTETSGAYAWTCKSSVNDRFLPSSCRD

Nucleotide

• Length: 441 bp

>NTDB_id=1151540 LG374_RS08160 WP_304518576.1 1669321..1669761(+) (pilE) [Cardiobacterium sp. Marseille-Q4385]
ATGAAAAACTATCAAAAAGGCTTTACGCTCATTGAACTAATGATCGTTATCGCTATTATTGGCATATTGGCGGCTATTGC
ACTGCCTTCTTATCAAGACTATCTGGCACGTTCACAAATGACGGAAGGATTGAATTTGGCAGGAGGACAAAAGAGTTCGG
TAACTGAATACCGCTCTAATAAAGGTGCGTGGCCTAGCTCCAATACTGAAGCAGGTATTCCGGCTCCCAGCGATATTGCA
GGAAAATATGTTGCGAGTGTAACTGTATCAGCCAGTGGCAGCAATGGTAATATTAGGGCGCTGATGAAAAGCAGTGGCGT
TTCAGCCCGCATTAGCGGTGCTGAACTCATTTTGCAAGGCACAGAAACCAGCGGTGCCTACGCTTGGACCTGTAAATCCA
GTGTGAACGATCGCTTCCTGCCTTCCAGCTGCCGCGACTAG

Domains

Predicted by InterproScan.

• Pilin (bacterial filament) (Pilin) (36-145)

• Prokaryotic N-terminal methylation motif (N_methyl) (3-28)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilE	Neisseria gonorrhoeae MS11	50	100	0.562
pilE	Neisseria gonorrhoeae strain FA1090	46.626	100	0.521
comP	Acinetobacter baylyi ADP1	43.226	100	0.459
pilA2	Legionella pneumophila str. Paris	41.958	97.945	0.411
pilA2	Legionella pneumophila strain ERS1305867	41.958	97.945	0.411
pilA	Acinetobacter baumannii strain A118	41.259	97.945	0.404
pilA	Haemophilus influenzae 86-028NP	40	99.315	0.397
pilA/pilA1	Eikenella corrodens VA1	37.179	100	0.397
pilA	Ralstonia pseudosolanacearum GMI1000	33.728	100	0.39
pilA	Vibrio cholerae strain A1552	36.364	100	0.384
pilA	Vibrio cholerae O1 biovar El Tor strain E7946	36.364	100	0.384
pilA	Vibrio cholerae C6706	36.364	100	0.384
pilA	Vibrio campbellii strain DS40M4	36	100	0.37
pilA/pilAI	Pseudomonas stutzeri DSM 10701	37.589	96.575	0.363
pilA/pilAII	Pseudomonas stutzeri DSM 10701	34.868	100	0.363