Detailed information NTG1148312

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: VTAP4600_RS09320
• Genome accession: NZ_LT960611
• Coordinates: 2085971..2086228 (-)
• Length: 85 a.a.
• NCBI ID: WP_415239687.1
• Uniprot ID: -
• Organism: Vibrio tapetis subsp. tapetis isolate Vibrio tapetis CECT4600
• Function: dsDNA binding (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2080971..2091228

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VTAP4600_RS09290 (VTAP4600_A1989)	-	2081454..2082011 (-)	558	WP_172443109.1	RNA methyltransferase	-
VTAP4600_RS09295 (VTAP4600_A1990)	yfbR	2082208..2082792 (+)	585	WP_102522544.1	5'-deoxynucleotidase	-
VTAP4600_RS09300 (VTAP4600_A1991)	-	2082870..2084204 (+)	1335	WP_102522545.1	anti-phage deoxyguanosine triphosphatase	-
VTAP4600_RS09305 (VTAP4600_A1992)	-	2084212..2084847 (-)	636	WP_102522546.1	tRNA-uridine aminocarboxypropyltransferase	-
VTAP4600_RS09310 (VTAP4600_A1993)	rrtA	2084746..2085429 (+)	684	WP_102523951.1	rhombosortase	-
VTAP4600_RS09320 (VTAP4600_A1994)	comEA	2085971..2086228 (-)	258	WP_415239687.1	ComEA family DNA-binding protein	Machinery gene
VTAP4600_RS09325 (VTAP4600_A1995)	ppiD	2086399..2088261 (-)	1863	WP_102522549.1	peptidylprolyl isomerase	-
VTAP4600_RS09330 (VTAP4600_A1996)	-	2088434..2088706 (-)	273	WP_102522550.1	HU family DNA-binding protein	-

Sequence

Protein

• Length: 85 a.a.
• Molecular weight: 9182.55 Da
• Isoelectric Point: 6.4725

>NTDB_id=1148312 VTAP4600_RS09320 WP_415239687.1 2085971..2086228(-) (comEA) [Vibrio tapetis subsp. tapetis isolate Vibrio tapetis CECT4600]
MVPKLGIAAETTTQSKHEGIEITVNINTADAEELAILLKGVGEKKAHEIVEFREANGQFKTAEELANVKGIGLATVEKNR
GRIKL

Nucleotide

• Length: 258 bp

>NTDB_id=1148312 VTAP4600_RS09320 WP_415239687.1 2085971..2086228(-) (comEA) [Vibrio tapetis subsp. tapetis isolate Vibrio tapetis CECT4600]
ATGGTGCCTAAATTAGGTATAGCAGCGGAAACCACAACACAAAGTAAGCATGAAGGTATCGAGATCACCGTTAACATTAA
TACCGCCGATGCAGAAGAGCTAGCGATTCTATTAAAAGGTGTCGGAGAGAAGAAAGCGCATGAAATCGTCGAATTTCGAG
AAGCGAACGGTCAGTTTAAAACTGCAGAAGAACTGGCAAATGTAAAAGGGATTGGCTTAGCAACCGTCGAGAAAAACCGC
GGTCGAATAAAGCTGTAG

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (23-83)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Vibrio parahaemolyticus RIMD 2210633	62.963	95.294	0.6
comEA	Vibrio cholerae C6706	60	100	0.6
comEA	Vibrio cholerae strain A1552	60	100	0.6
comEA	Vibrio campbellii strain DS40M4	62.821	91.765	0.576
comEA	Lactococcus lactis subsp. cremoris KW2	37.234	100	0.412
comEA/comE1	Glaesserella parasuis strain SC1401	58.333	70.588	0.412
comE1/comEA	Haemophilus influenzae Rd KW20	56.667	70.588	0.4
comEA	Acinetobacter baylyi ADP1	49.275	81.176	0.4
comEA/celA/cilE	Streptococcus pneumoniae Rx1	44.595	87.059	0.388
comEA/celA/cilE	Streptococcus pneumoniae R6	44.595	87.059	0.388
comEA/celA/cilE	Streptococcus pneumoniae D39	44.595	87.059	0.388
comEA	Acinetobacter baumannii strain A118	53.226	72.941	0.388
comEA/celA/cilE	Streptococcus mitis NCTC 12261	45.205	85.882	0.388
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	45.205	85.882	0.388
comEA	Acinetobacter baumannii D1279779	51.613	72.941	0.376
comEA	Legionella pneumophila strain ERS1305867	44.444	84.706	0.376
comEA	Legionella pneumophila str. Paris	44.444	84.706	0.376