Detailed information NTG1141936

Bioinformatically predicted

Overview

• Name: comGC/cglC
• Type: Machinery gene
• Locus tag: DQK98_RS10145
• Genome accession: NZ_LS483449
• Coordinates: 1896389..1896715 (-)
• Length: 108 a.a.
• NCBI ID: WP_000738638.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 4041STDY6836170
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1891389..1901715

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQK98_RS10105	rnpA	1891413..1891784 (-)	372	WP_000739246.1	ribonuclease P protein component	-
DQK98_RS12175	-	1891801..1891932 (-)	132	WP_000768904.1	hypothetical protein	-
DQK98_RS10110	-	1891933..1893123 (-)	1191	WP_000167766.1	acetate kinase	-
DQK98_RS10115	comYH	1893174..1894127 (-)	954	WP_000345119.1	class I SAM-dependent methyltransferase	Machinery gene
DQK98_RS10120	-	1894188..1894775 (-)	588	WP_000679774.1	class I SAM-dependent methyltransferase	-
DQK98_RS10125	comGG/cglG	1894912..1895325 (-)	414	WP_000265630.1	competence type IV pilus minor pilin ComGG	Machinery gene
DQK98_RS10130	comGF/cglF	1895303..1895764 (-)	462	WP_000250545.1	competence type IV pilus minor pilin ComGF	Machinery gene
DQK98_RS10135	comGE/cglE	1895727..1896029 (-)	303	WP_000413380.1	competence type IV pilus minor pilin ComGE	Machinery gene
DQK98_RS10140	comGD/cglD	1895992..1896396 (-)	405	WP_000588006.1	competence type IV pilus minor pilin ComGD	Machinery gene
DQK98_RS10145	comGC/cglC	1896389..1896715 (-)	327	WP_000738638.1	comG operon protein ComGC	Machinery gene
DQK98_RS10150	comGB/cglB	1896717..1897733 (-)	1017	WP_075270915.1	competence type IV pilus assembly protein ComGB	Machinery gene
DQK98_RS10155	comGA/cglA/cilD	1897681..1898622 (-)	942	WP_000249550.1	competence type IV pilus ATPase ComGA	Machinery gene
DQK98_RS10160	-	1898698..1899063 (-)	366	WP_000286415.1	DUF1033 family protein	-
DQK98_RS10165	-	1899214..1900272 (-)	1059	WP_000649466.1	zinc-dependent alcohol dehydrogenase family protein	-
DQK98_RS10170	nagA	1900435..1901586 (-)	1152	WP_001134457.1	N-acetylglucosamine-6-phosphate deacetylase	-

Sequence

Protein

• Length: 108 a.a.
• Molecular weight: 12173.35 Da
• Isoelectric Point: 10.0523

>NTDB_id=1141936 DQK98_RS10145 WP_000738638.1 1896389..1896715(-) (comGC/cglC) [Streptococcus pneumoniae strain 4041STDY6836170]
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLFLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLEKNEDASLSKLQA
DGRITEEQAKAYKEYHDKNGVANRKVND

Nucleotide

• Length: 327 bp

>NTDB_id=1141936 DQK98_RS10145 WP_000738638.1 1896389..1896715(-) (comGC/cglC) [Streptococcus pneumoniae strain 4041STDY6836170]
ATGAAAAAAATGATGACATTCTTGAAAAAAGCTAAGGTTAAAGCTTTTACATTGGTGGAGATGTTGGTGGTCTTGCTGAT
TATCAGCGTGCTTTTCTTGCTCTTTGTACCTAATCTGACCAAGCAAAAAGAGGCAGTCAATGACAAAGGAAAAGCAGCTG
TTGTTAAGGTGGTGGAAAGCCAGGCAGAACTTTATAGCTTGGAAAAGAATGAAGATGCTAGCCTAAGCAAGTTACAAGCA
GATGGGCGAATCACGGAAGAACAGGCTAAAGCTTATAAAGAATACCATGATAAAAATGGAGTAGCAAATCGTAAAGTCAA
TGATTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (11-34)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC/cglC	Streptococcus pneumoniae Rx1	98.148	100	0.981
comGC/cglC	Streptococcus pneumoniae D39	98.148	100	0.981
comGC/cglC	Streptococcus pneumoniae R6	98.148	100	0.981
comGC/cglC	Streptococcus pneumoniae TIGR4	97.222	100	0.972
comGC/cglC	Streptococcus mitis SK321	94.444	100	0.944
comGC/cglC	Streptococcus mitis NCTC 12261	93.137	94.444	0.88
comYC	Streptococcus gordonii str. Challis substr. CH1	72.917	88.889	0.648
comYC	Streptococcus mutans UA140	63.725	94.444	0.602
comYC	Streptococcus mutans UA159	63.725	94.444	0.602
comYC	Streptococcus suis isolate S10	70.37	75	0.528
comGC	Lactococcus lactis subsp. cremoris KW2	54.902	94.444	0.519
comGC	Staphylococcus aureus MW2	50	79.63	0.398
comGC	Staphylococcus aureus N315	50	79.63	0.398
comGC	Latilactobacillus sakei subsp. sakei 23K	45.349	79.63	0.361