Detailed information
Bioinformatically predicted
Overview
| Name | comYC | Type | Machinery gene |
| Locus tag | DQM73_RS11170 | Genome accession | NZ_LS483346 |
| Coordinates | 2249267..2249584 (-) | Length | 105 a.a. |
| NCBI ID | WP_002927120.1 | Uniprot ID | A0AA96NS04 |
| Organism | Streptococcus sanguinis strain NCTC11085 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2244267..2254584
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM73_RS11135 (NCTC11085_02189) | - | 2244659..2245408 (-) | 750 | WP_002927096.1 | CPBP family intramembrane glutamic endopeptidase | - |
| DQM73_RS11140 (NCTC11085_02190) | - | 2245543..2246736 (-) | 1194 | WP_002927099.1 | acetate kinase | - |
| DQM73_RS11145 (NCTC11085_02191) | comYH | 2246773..2247738 (-) | 966 | WP_002927105.1 | class I SAM-dependent methyltransferase | Machinery gene |
| DQM73_RS11150 (NCTC11085_02192) | comGG | 2247820..2248212 (-) | 393 | WP_002927107.1 | competence type IV pilus minor pilin ComGG | - |
| DQM73_RS11155 (NCTC11085_02193) | comGF/cglF | 2248193..2248630 (-) | 438 | WP_002927109.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DQM73_RS11160 (NCTC11085_02194) | comGE/cglE | 2248614..2248907 (-) | 294 | WP_002911065.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| DQM73_RS11165 (NCTC11085_02195) | comYD | 2248873..2249307 (-) | 435 | WP_002934686.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| DQM73_RS11170 (NCTC11085_02196) | comYC | 2249267..2249584 (-) | 318 | WP_002927120.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DQM73_RS11175 (NCTC11085_02197) | comYB | 2249584..2250618 (-) | 1035 | WP_260469178.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DQM73_RS11180 (NCTC11085_02198) | comYA | 2250548..2251489 (-) | 942 | WP_002927124.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DQM73_RS11185 (NCTC11085_02199) | - | 2251619..2251999 (-) | 381 | WP_002927126.1 | DUF1033 family protein | - |
| DQM73_RS12370 (NCTC11085_02200) | - | 2252025..2252252 (-) | 228 | WP_002927128.1 | hypothetical protein | - |
| DQM73_RS11195 (NCTC11085_02201) | - | 2252419..2253525 (-) | 1107 | WP_002927130.1 | glycosyl hydrolase family 8 | - |
Sequence
Protein
Download Length: 105 a.a. Molecular weight: 11427.35 Da Isoelectric Point: 9.9006
>NTDB_id=1137725 DQM73_RS11170 WP_002927120.1 2249267..2249584(-) (comYC) [Streptococcus sanguinis strain NCTC11085]
MKKLNKLKVQAFTLVEMLIVLLVISVLLLLFVPNLTKQKDAVSDTGTAAVVKVVESQAELYELKNTNEKASLSKLVSAGN
ISQKQADSYKAYYGKHSGETQAVAN
MKKLNKLKVQAFTLVEMLIVLLVISVLLLLFVPNLTKQKDAVSDTGTAAVVKVVESQAELYELKNTNEKASLSKLVSAGN
ISQKQADSYKAYYGKHSGETQAVAN
Nucleotide
Download Length: 318 bp
>NTDB_id=1137725 DQM73_RS11170 WP_002927120.1 2249267..2249584(-) (comYC) [Streptococcus sanguinis strain NCTC11085]
ATGAAAAAACTTAATAAATTGAAGGTTCAAGCATTCACCCTTGTGGAAATGCTGATTGTCTTGCTGGTTATCAGCGTACT
CTTGCTGCTCTTTGTGCCTAATCTGACCAAGCAAAAAGATGCTGTTTCAGATACAGGAACTGCAGCGGTGGTCAAGGTGG
TAGAAAGCCAGGCAGAGCTGTATGAATTGAAGAATACCAATGAAAAGGCTAGCCTGAGCAAGCTAGTCAGCGCAGGAAAT
ATCAGCCAGAAGCAGGCAGATTCATATAAGGCTTACTATGGAAAACACAGTGGCGAAACTCAAGCAGTTGCCAATTAA
ATGAAAAAACTTAATAAATTGAAGGTTCAAGCATTCACCCTTGTGGAAATGCTGATTGTCTTGCTGGTTATCAGCGTACT
CTTGCTGCTCTTTGTGCCTAATCTGACCAAGCAAAAAGATGCTGTTTCAGATACAGGAACTGCAGCGGTGGTCAAGGTGG
TAGAAAGCCAGGCAGAGCTGTATGAATTGAAGAATACCAATGAAAAGGCTAGCCTGAGCAAGCTAGTCAGCGCAGGAAAT
ATCAGCCAGAAGCAGGCAGATTCATATAAGGCTTACTATGGAAAACACAGTGGCGAAACTCAAGCAGTTGCCAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
83.81 |
100 |
0.838 |
| comYC | Streptococcus mutans UA159 |
68.571 |
100 |
0.686 |
| comYC | Streptococcus mutans UA140 |
68.571 |
100 |
0.686 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
67.647 |
97.143 |
0.657 |
| comGC/cglC | Streptococcus mitis SK321 |
68 |
95.238 |
0.648 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
66 |
95.238 |
0.629 |
| comGC/cglC | Streptococcus pneumoniae D39 |
66 |
95.238 |
0.629 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
66 |
95.238 |
0.629 |
| comGC/cglC | Streptococcus pneumoniae R6 |
66 |
95.238 |
0.629 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
59 |
95.238 |
0.562 |
| comYC | Streptococcus suis isolate S10 |
61.798 |
84.762 |
0.524 |
| comGC | Staphylococcus aureus MW2 |
43.878 |
93.333 |
0.41 |
| comGC | Staphylococcus aureus N315 |
43.878 |
93.333 |
0.41 |