Detailed information NTG1128360

Bioinformatically predicted

Overview

• Name: comGC/cglC
• Type: Machinery gene
• Locus tag: FJH52_RS09825
• Genome accession: NZ_LR595848
• Coordinates: 1941354..1941680 (-)
• Length: 108 a.a.
• NCBI ID: WP_000738623.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 4559 isolate 4559
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1936354..1946680

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FJH52_RS09785	rnpA	1936379..1936750 (-)	372	WP_000739246.1	ribonuclease P protein component	-
FJH52_RS09790	-	1936898..1938088 (-)	1191	WP_000167755.1	acetate kinase	-
FJH52_RS09795	comYH	1938139..1939092 (-)	954	WP_000345084.1	class I SAM-dependent methyltransferase	Machinery gene
FJH52_RS09800	-	1939153..1939740 (-)	588	Protein_1927	class I SAM-dependent methyltransferase	-
FJH52_RS09805	comGG/cglG	1939877..1940290 (-)	414	WP_000265617.1	competence type IV pilus minor pilin ComGG	Machinery gene
FJH52_RS09810	comGF/cglF	1940268..1940729 (-)	462	WP_000250529.1	competence type IV pilus minor pilin ComGF	Machinery gene
FJH52_RS09815	comGE/cglE	1940692..1940994 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
FJH52_RS09820	comGD/cglD	1940957..1941361 (-)	405	WP_000588002.1	competence type IV pilus minor pilin ComGD	Machinery gene
FJH52_RS09825	comGC/cglC	1941354..1941680 (-)	327	WP_000738623.1	comG operon protein ComGC	Machinery gene
FJH52_RS09830	comGB/cglB	1941682..1942698 (-)	1017	WP_077141332.1	competence type IV pilus assembly protein ComGB	Machinery gene
FJH52_RS09835	comGA/cglA/cilD	1942646..1943587 (-)	942	WP_000249550.1	competence type IV pilus ATPase ComGA	Machinery gene
FJH52_RS09840	-	1943663..1944028 (-)	366	WP_000286415.1	DUF1033 family protein	-
FJH52_RS09845	-	1944179..1945237 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-
FJH52_RS09850	nagA	1945400..1946551 (-)	1152	WP_001134457.1	N-acetylglucosamine-6-phosphate deacetylase	-

Sequence

Protein

• Length: 108 a.a.
• Molecular weight: 12187.38 Da
• Isoelectric Point: 10.0523

>NTDB_id=1128360 FJH52_RS09825 WP_000738623.1 1941354..1941680(-) (comGC/cglC) [Streptococcus pneumoniae strain 4559 isolate 4559]
MKKMMTFLKKAKVKAFTLIEMLVVLLIISVLFLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLEKNEDASLSKLQA
DGRITEEQAKAYKEYHDKNGVANRKVND

Nucleotide

• Length: 327 bp

>NTDB_id=1128360 FJH52_RS09825 WP_000738623.1 1941354..1941680(-) (comGC/cglC) [Streptococcus pneumoniae strain 4559 isolate 4559]
ATGAAAAAAATGATGACATTCTTGAAAAAAGCTAAGGTTAAAGCTTTTACATTGATTGAGATGTTGGTGGTCTTGCTGAT
TATCAGCGTGCTTTTCTTGCTCTTTGTACCTAATCTGACCAAGCAAAAAGAGGCAGTCAATGACAAAGGAAAAGCAGCTG
TTGTTAAGGTGGTGGAAAGCCAGGCAGAACTTTATAGCTTGGAAAAGAATGAAGATGCTAGCCTAAGCAAGTTACAAGCA
GATGGGCGAATCACGGAAGAACAGGCTAAAGCTTATAAAGAATACCATGATAAAAATGGAGTAGCAAATCGTAAAGTCAA
TGATTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (11-34)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC/cglC	Streptococcus pneumoniae Rx1	97.222	100	0.972
comGC/cglC	Streptococcus pneumoniae D39	97.222	100	0.972
comGC/cglC	Streptococcus pneumoniae R6	97.222	100	0.972
comGC/cglC	Streptococcus pneumoniae TIGR4	96.296	100	0.963
comGC/cglC	Streptococcus mitis SK321	93.519	100	0.935
comGC/cglC	Streptococcus mitis NCTC 12261	92.157	94.444	0.87
comYC	Streptococcus gordonii str. Challis substr. CH1	71.875	88.889	0.639
comYC	Streptococcus mutans UA159	64.706	94.444	0.611
comYC	Streptococcus mutans UA140	64.706	94.444	0.611
comGC	Lactococcus lactis subsp. cremoris KW2	55.882	94.444	0.528
comYC	Streptococcus suis isolate S10	69.136	75	0.519
comGC	Staphylococcus aureus MW2	51.163	79.63	0.407
comGC	Staphylococcus aureus N315	51.163	79.63	0.407
comGC	Latilactobacillus sakei subsp. sakei 23K	46.512	79.63	0.37