Detailed information NTG1128357

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: FJH52_RS09810
• Genome accession: NZ_LR595848
• Coordinates: 1940268..1940729 (-)
• Length: 153 a.a.
• NCBI ID: WP_000250529.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 4559 isolate 4559
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1935268..1945729

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FJH52_RS09780	-	1935580..1936404 (-)	825	WP_000727904.1	membrane protein insertase YidC	-
FJH52_RS09785	rnpA	1936379..1936750 (-)	372	WP_000739246.1	ribonuclease P protein component	-
FJH52_RS09790	-	1936898..1938088 (-)	1191	WP_000167755.1	acetate kinase	-
FJH52_RS09795	comYH	1938139..1939092 (-)	954	WP_000345084.1	class I SAM-dependent methyltransferase	Machinery gene
FJH52_RS09800	-	1939153..1939740 (-)	588	Protein_1927	class I SAM-dependent methyltransferase	-
FJH52_RS09805	comGG/cglG	1939877..1940290 (-)	414	WP_000265617.1	competence type IV pilus minor pilin ComGG	Machinery gene
FJH52_RS09810	comGF/cglF	1940268..1940729 (-)	462	WP_000250529.1	competence type IV pilus minor pilin ComGF	Machinery gene
FJH52_RS09815	comGE/cglE	1940692..1940994 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
FJH52_RS09820	comGD/cglD	1940957..1941361 (-)	405	WP_000588002.1	competence type IV pilus minor pilin ComGD	Machinery gene
FJH52_RS09825	comGC/cglC	1941354..1941680 (-)	327	WP_000738623.1	comG operon protein ComGC	Machinery gene
FJH52_RS09830	comGB/cglB	1941682..1942698 (-)	1017	WP_077141332.1	competence type IV pilus assembly protein ComGB	Machinery gene
FJH52_RS09835	comGA/cglA/cilD	1942646..1943587 (-)	942	WP_000249550.1	competence type IV pilus ATPase ComGA	Machinery gene
FJH52_RS09840	-	1943663..1944028 (-)	366	WP_000286415.1	DUF1033 family protein	-
FJH52_RS09845	-	1944179..1945237 (-)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17851.34 Da
• Isoelectric Point: 6.4832

>NTDB_id=1128357 FJH52_RS09810 WP_000250529.1 1940268..1940729(-) (comGF/cglF) [Streptococcus pneumoniae strain 4559 isolate 4559]
MVQNSCWQSKSHKVKAFTLLESLLALIVISGGLLLFQAMSQLLISEVRYQQQSEQKEWLLFVDQLEAELDRSQFEKVESN
RLYMKQDGKDIAIGKSKSDDFRKTDASGRGYQPMVYGLKSAQITEDNQLVHFRFQFQKGLEREFIYRVEKEES

Nucleotide

• Length: 462 bp

>NTDB_id=1128357 FJH52_RS09810 WP_000250529.1 1940268..1940729(-) (comGF/cglF) [Streptococcus pneumoniae strain 4559 isolate 4559]
ATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAAGGTCAAGGCTTTTACCTTGTTAGAATCCCTGCTTGCCCTCAT
TGTCATCAGTGGGGGATTACTCCTTTTTCAAGCTATGAGTCAGCTCCTCATTTCAGAAGTTCGCTACCAGCAACAAAGCG
AGCAAAAGGAGTGGCTCTTGTTTGTGGACCAACTTGAGGCAGAATTAGACCGTTCGCAGTTCGAAAAAGTAGAAAGCAAT
CGCCTATACATGAAGCAAGATGGCAAGGACATCGCCATCGGTAAGTCAAAGTCAGACGATTTTCGTAAAACCGATGCTAG
TGGACGGGGGTATCAGCCTATGGTTTATGGCCTCAAATCAGCTCAGATTACAGAGGACAATCAACTGGTTCATTTTCGTT
TCCAGTTTCAAAAAGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGAAGAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	94.118	100	0.941
comGF/cglF	Streptococcus pneumoniae D39	94.118	100	0.941
comGF/cglF	Streptococcus pneumoniae R6	94.118	100	0.941
comGF/cglF	Streptococcus pneumoniae TIGR4	94.118	100	0.941
comGF/cglF	Streptococcus mitis SK321	92.81	100	0.928
comGF/cglF	Streptococcus mitis NCTC 12261	91.503	100	0.915