Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | LOA_RS04145 | Genome accession | NZ_CP004006 |
| Coordinates | 833354..833803 (+) | Length | 149 a.a. |
| NCBI ID | WP_118996625.1 | Uniprot ID | - |
| Organism | Legionella oakridgensis ATCC 33761 = DSM 21215 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 828354..838803
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LOA_RS04125 (Loa_00921) | - | 829662..831728 (-) | 2067 | WP_025385257.1 | hypothetical protein | - |
| LOA_RS04130 (Loa_00922) | - | 832028..832480 (-) | 453 | WP_025385258.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| LOA_RS04135 (Loa_00923) | - | 832473..832790 (-) | 318 | WP_025385259.1 | BolA family protein | - |
| LOA_RS04145 (Loa_00924) | pilA2 | 833354..833803 (+) | 450 | WP_118996625.1 | pilin | Machinery gene |
| LOA_RS04150 (Loa_00925) | - | 833847..835082 (-) | 1236 | WP_025385262.1 | 6-phosphofructokinase | - |
| LOA_RS04155 (Loa_00926) | letS | 835282..838041 (-) | 2760 | WP_025385263.1 | two-component system sensor histidine kinase LetS | Regulator |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 15257.50 Da Isoelectric Point: 4.9220
>NTDB_id=111993 LOA_RS04145 WP_118996625.1 833354..833803(+) (pilA2) [Legionella oakridgensis ATCC 33761 = DSM 21215]
MDSFILEGQVMKRQQGFTLIELMIVVAIIGILAAVAIPAYQDYTIRARVTEGLNLAAAAKLAVSETAISNNALPANQAAT
GYTSPAATNNVASIAIANDGTAAITVTYVAAIGGGGTIILTPTLTANGDVTWTCTGGTLADRFRPANCR
MDSFILEGQVMKRQQGFTLIELMIVVAIIGILAAVAIPAYQDYTIRARVTEGLNLAAAAKLAVSETAISNNALPANQAAT
GYTSPAATNNVASIAIANDGTAAITVTYVAAIGGGGTIILTPTLTANGDVTWTCTGGTLADRFRPANCR
Nucleotide
Download Length: 450 bp
>NTDB_id=111993 LOA_RS04145 WP_118996625.1 833354..833803(+) (pilA2) [Legionella oakridgensis ATCC 33761 = DSM 21215]
ATGGATTCATTTATTTTAGAGGGACAAGTCATGAAAAGACAGCAAGGTTTTACCCTGATTGAGCTTATGATTGTAGTGGC
CATTATTGGCATTCTTGCTGCAGTGGCCATTCCGGCTTATCAGGATTATACAATTCGGGCAAGGGTTACCGAAGGGCTGA
ATTTAGCTGCTGCGGCAAAACTTGCGGTTTCTGAAACAGCAATATCCAATAATGCTTTGCCGGCAAACCAGGCAGCAACA
GGATATACCAGTCCAGCCGCAACCAATAATGTGGCTTCAATTGCTATCGCTAACGATGGTACGGCTGCCATTACAGTTAC
TTATGTTGCTGCGATTGGCGGTGGTGGGACAATCATATTAACGCCTACTCTAACGGCCAATGGTGATGTTACTTGGACTT
GTACAGGAGGCACCTTAGCAGACAGATTTCGACCGGCGAATTGTCGATAA
ATGGATTCATTTATTTTAGAGGGACAAGTCATGAAAAGACAGCAAGGTTTTACCCTGATTGAGCTTATGATTGTAGTGGC
CATTATTGGCATTCTTGCTGCAGTGGCCATTCCGGCTTATCAGGATTATACAATTCGGGCAAGGGTTACCGAAGGGCTGA
ATTTAGCTGCTGCGGCAAAACTTGCGGTTTCTGAAACAGCAATATCCAATAATGCTTTGCCGGCAAACCAGGCAGCAACA
GGATATACCAGTCCAGCCGCAACCAATAATGTGGCTTCAATTGCTATCGCTAACGATGGTACGGCTGCCATTACAGTTAC
TTATGTTGCTGCGATTGGCGGTGGTGGGACAATCATATTAACGCCTACTCTAACGGCCAATGGTGATGTTACTTGGACTT
GTACAGGAGGCACCTTAGCAGACAGATTTCGACCGGCGAATTGTCGATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila strain ERS1305867 |
80.292 |
91.946 |
0.738 |
| pilA2 | Legionella pneumophila str. Paris |
80.292 |
91.946 |
0.738 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
49.697 |
100 |
0.55 |
| comP | Acinetobacter baylyi ADP1 |
47.651 |
100 |
0.477 |
| pilA | Haemophilus influenzae 86-028NP |
41.722 |
100 |
0.423 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
34.239 |
100 |
0.423 |
| pilA | Pseudomonas aeruginosa PAK |
41.447 |
100 |
0.423 |
| pilA | Vibrio campbellii strain DS40M4 |
43.885 |
93.289 |
0.409 |
| pilA/pilA1 | Eikenella corrodens VA1 |
39.869 |
100 |
0.409 |
| pilE | Neisseria gonorrhoeae MS11 |
37.5 |
100 |
0.403 |
| pilA | Haemophilus influenzae Rd KW20 |
40.816 |
98.658 |
0.403 |
| pilA | Acinetobacter baumannii strain A118 |
39.86 |
95.973 |
0.383 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
38.462 |
95.973 |
0.369 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
39.007 |
94.631 |
0.369 |