Detailed information
Bioinformatically predicted
Overview
| Name | comGC/cglC | Type | Machinery gene |
| Locus tag | A66_RS09240 | Genome accession | NZ_LN847353 |
| Coordinates | 1756273..1756599 (-) | Length | 108 a.a. |
| NCBI ID | WP_000738630.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae strain A66 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1751273..1761599
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A66_RS09205 (A66_01837) | comYH | 1751679..1752632 (-) | 954 | WP_000345126.1 | class I SAM-dependent methyltransferase | Machinery gene |
| A66_RS09210 | - | 1752911..1753514 (+) | 604 | Protein_1790 | transposase family protein | - |
| A66_RS09215 (A66_01840) | - | 1753665..1754141 (+) | 477 | WP_000777686.1 | GNAT family N-acetyltransferase | - |
| A66_RS09220 (A66_01841) | comGG/cglG | 1754796..1755209 (-) | 414 | WP_000265630.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| A66_RS09225 (A66_01842) | comGF/cglF | 1755187..1755648 (-) | 462 | WP_000250545.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| A66_RS09230 (A66_01843) | comGE/cglE | 1755611..1755913 (-) | 303 | WP_000413380.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| A66_RS09235 (A66_01844) | comGD/cglD | 1755876..1756280 (-) | 405 | WP_050365326.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| A66_RS09240 (A66_01845) | comGC/cglC | 1756273..1756599 (-) | 327 | WP_000738630.1 | comG operon protein ComGC | Machinery gene |
| A66_RS09245 (A66_01846) | comGB/cglB | 1756601..1757617 (-) | 1017 | WP_074017570.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| A66_RS09250 (A66_01847) | comGA/cglA/cilD | 1757565..1758506 (-) | 942 | WP_000249571.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| A66_RS09255 (A66_01848) | - | 1758582..1758947 (-) | 366 | WP_000286415.1 | DUF1033 family protein | - |
| A66_RS09260 (A66_01849) | - | 1759098..1760156 (-) | 1059 | WP_000649468.1 | zinc-dependent alcohol dehydrogenase family protein | - |
| A66_RS09265 (A66_01850) | nagA | 1760319..1761470 (-) | 1152 | WP_001134454.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 12247.38 Da Isoelectric Point: 9.8692
>NTDB_id=1114603 A66_RS09240 WP_000738630.1 1756273..1756599(-) (comGC/cglC) [Streptococcus pneumoniae strain A66]
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLFLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLEKNEDASLSKLKD
DGRITEEQAKAYKEYHDKNGEANRKVND
MKKMMTFLKKAKVKAFTLVEMLVVLLIISVLFLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLEKNEDASLSKLKD
DGRITEEQAKAYKEYHDKNGEANRKVND
Nucleotide
Download Length: 327 bp
>NTDB_id=1114603 A66_RS09240 WP_000738630.1 1756273..1756599(-) (comGC/cglC) [Streptococcus pneumoniae strain A66]
ATGAAAAAAATGATGACATTCTTGAAAAAAGCTAAGGTTAAAGCTTTTACATTGGTGGAAATGTTGGTGGTCTTGCTGAT
TATCAGCGTGCTTTTCTTGCTCTTTGTACCTAATCTGACCAAGCAAAAAGAAGCAGTCAATGACAAAGGAAAAGCAGCTG
TTGTTAAGGTGGTGGAAAGCCAGGCAGAACTTTATAGCTTGGAAAAGAATGAAGATGCTAGCCTAAGCAAGTTAAAAGAC
GATGGGCGAATCACGGAAGAACAGGCTAAAGCTTATAAAGAATACCATGATAAAAATGGAGAAGCAAATCGTAAAGTCAA
TGATTAA
ATGAAAAAAATGATGACATTCTTGAAAAAAGCTAAGGTTAAAGCTTTTACATTGGTGGAAATGTTGGTGGTCTTGCTGAT
TATCAGCGTGCTTTTCTTGCTCTTTGTACCTAATCTGACCAAGCAAAAAGAAGCAGTCAATGACAAAGGAAAAGCAGCTG
TTGTTAAGGTGGTGGAAAGCCAGGCAGAACTTTATAGCTTGGAAAAGAATGAAGATGCTAGCCTAAGCAAGTTAAAAGAC
GATGGGCGAATCACGGAAGAACAGGCTAAAGCTTATAAAGAATACCATGATAAAAATGGAGAAGCAAATCGTAAAGTCAA
TGATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC/cglC | Streptococcus pneumoniae Rx1 |
96.296 |
100 |
0.963 |
| comGC/cglC | Streptococcus pneumoniae D39 |
96.296 |
100 |
0.963 |
| comGC/cglC | Streptococcus pneumoniae R6 |
96.296 |
100 |
0.963 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
95.37 |
100 |
0.954 |
| comGC/cglC | Streptococcus mitis SK321 |
92.593 |
100 |
0.926 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
94.898 |
90.741 |
0.861 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
67.961 |
95.37 |
0.648 |
| comYC | Streptococcus mutans UA159 |
62.745 |
94.444 |
0.593 |
| comYC | Streptococcus mutans UA140 |
62.745 |
94.444 |
0.593 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
54.902 |
94.444 |
0.519 |
| comYC | Streptococcus suis isolate S10 |
67.901 |
75 |
0.509 |
| comGC | Staphylococcus aureus MW2 |
46.078 |
94.444 |
0.435 |
| comGC | Staphylococcus aureus N315 |
46.078 |
94.444 |
0.435 |
| comGC | Latilactobacillus sakei subsp. sakei 23K |
45.349 |
79.63 |
0.361 |