Detailed information NTG1049606

Bioinformatically predicted

Overview

• Name: pilA2
• Type: Machinery gene
• Locus tag: ACEJ41_RS10780
• Genome accession: NZ_CP169056
• Coordinates: 2352675..2353106 (-)
• Length: 143 a.a.
• NCBI ID: WP_374012271.1
• Uniprot ID: -
• Organism: Pseudoxanthomonas koreensis strain TDY-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2347675..2358106

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEJ41_RS10755 (ACEJ41_10755)	-	2348002..2348253 (-)	252	WP_374014125.1	pilin	-
ACEJ41_RS10760 (ACEJ41_10760)	-	2348283..2349175 (+)	893	Protein_2106	IS5 family transposase	-
ACEJ41_RS10765 (ACEJ41_10765)	-	2349561..2351429 (-)	1869	WP_374012268.1	sulfatase-like hydrolase/transferase	-
ACEJ41_RS10770 (ACEJ41_10770)	-	2351419..2352042 (-)	624	WP_374012269.1	class I SAM-dependent methyltransferase	-
ACEJ41_RS10775 (ACEJ41_10775)	pilA	2352151..2352564 (-)	414	WP_374012270.1	pilin	Machinery gene
ACEJ41_RS10780 (ACEJ41_10780)	pilA2	2352675..2353106 (-)	432	WP_374012271.1	pilin	Machinery gene
ACEJ41_RS10785 (ACEJ41_10785)	pilC	2353481..2354740 (+)	1260	WP_374012272.1	type II secretion system F family protein	Machinery gene
ACEJ41_RS10790 (ACEJ41_10790)	-	2354757..2355623 (+)	867	WP_374012273.1	A24 family peptidase	-
ACEJ41_RS10795 (ACEJ41_10795)	-	2355819..2356100 (+)	282	WP_374012274.1	type II toxin-antitoxin system RelE/ParE family toxin	-
ACEJ41_RS10800 (ACEJ41_10800)	-	2356108..2356401 (+)	294	WP_374012275.1	HigA family addiction module antitoxin	-
ACEJ41_RS10805 (ACEJ41_10805)	-	2356770..2357687 (+)	918	WP_374012276.1	histone deacetylase family protein	-

Sequence

Protein

• Length: 143 a.a.
• Molecular weight: 14539.77 Da
• Isoelectric Point: 8.1062

>NTDB_id=1049606 ACEJ41_RS10780 WP_374012271.1 2352675..2353106(-) (pilA2) [Pseudoxanthomonas koreensis strain TDY-1]
MKKNMQGFTLIELMIVVAIIAILAAIALPAYQDYTIRARVSELAVIAGAAKNTVAENIANNGGALPADACAGVEVTIPAA
SRNTASMTCTGATGVIQVTGNATRTNGTILTFTPTVAATAAVGTTWTCVGSGSQAKYYPAECR

Nucleotide

• Length: 432 bp

>NTDB_id=1049606 ACEJ41_RS10780 WP_374012271.1 2352675..2353106(-) (pilA2) [Pseudoxanthomonas koreensis strain TDY-1]
ATGAAGAAGAACATGCAGGGCTTCACCCTGATCGAACTGATGATCGTGGTCGCGATCATCGCCATCCTGGCCGCGATTGC
GCTGCCGGCCTACCAGGACTACACCATCCGTGCGCGCGTGTCCGAGCTCGCCGTCATTGCGGGCGCTGCCAAGAACACGG
TGGCAGAAAATATTGCCAACAATGGCGGGGCGCTGCCGGCTGATGCGTGTGCGGGTGTTGAGGTGACCATTCCTGCCGCC
TCTCGGAATACTGCGTCGATGACTTGCACGGGAGCTACCGGTGTTATCCAGGTGACTGGTAACGCGACCCGTACCAATGG
CACCATCCTTACCTTTACGCCCACGGTTGCTGCTACCGCTGCCGTTGGGACTACTTGGACATGCGTTGGTAGTGGCAGCC
AGGCCAAGTACTATCCTGCCGAGTGCCGTTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (3-28)

• Pilin (bacterial filament) (Pilin) (37-143)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA2	Legionella pneumophila str. Paris	57.554	97.203	0.559
pilA2	Legionella pneumophila strain ERS1305867	56.835	97.203	0.552
comP	Acinetobacter baylyi ADP1	50	100	0.517
pilA	Ralstonia pseudosolanacearum GMI1000	43.713	100	0.51
pilA/pilA1	Eikenella corrodens VA1	40.26	100	0.434
pilE	Neisseria gonorrhoeae MS11	36.875	100	0.413
pilE	Neisseria gonorrhoeae strain FA1090	37.662	100	0.406
pilA/pilAI	Pseudomonas stutzeri DSM 10701	37.419	100	0.406
pilA	Haemophilus influenzae Rd KW20	39.437	99.301	0.392
pilA	Pseudomonas aeruginosa PAK	34.591	100	0.385
pilA	Haemophilus influenzae 86-028NP	38.732	99.301	0.385
pilA/pilAII	Pseudomonas stutzeri DSM 10701	34.667	100	0.364
pilA	Vibrio parahaemolyticus RIMD 2210633	40	90.909	0.364
pilA	Acinetobacter baumannii strain A118	35.862	100	0.364