Detailed information NTG1038838

Bioinformatically predicted

Overview

• Name: pilA2
• Type: Machinery gene
• Locus tag: ACCP84_RS15740
• Genome accession: NZ_CP167201
• Coordinates: 3650980..3651408 (-)
• Length: 142 a.a.
• NCBI ID: WP_039587436.1
• Uniprot ID: -
• Organism: Xanthomonas axonopodis pv. ricini strain NCPPB 2369
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3645980..3656408

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACCP84_RS15725 (ACCP84_15775)	pilR	3647036..3648490 (+)	1455	WP_011348337.1	sigma-54 dependent transcriptional regulator	Regulator
ACCP84_RS15730 (ACCP84_15780)	pilB	3648712..3648831 (-)	120	WP_136732873.1	pilus assembly protein	Machinery gene
ACCP84_RS15735 (ACCP84_15785)	pilB	3649109..3650842 (-)	1734	WP_372170877.1	type IV-A pilus assembly ATPase PilB	Machinery gene
ACCP84_RS15740 (ACCP84_15790)	pilA2	3650980..3651408 (-)	429	WP_039587436.1	pilin	Machinery gene
ACCP84_RS15745 (ACCP84_15795)	pilC	3651753..3653015 (+)	1263	WP_078515376.1	type II secretion system F family protein	Machinery gene
ACCP84_RS15750 (ACCP84_15800)	-	3653022..3653885 (+)	864	WP_008576868.1	A24 family peptidase	-
ACCP84_RS15755 (ACCP84_15805)	coaE	3653899..3654510 (+)	612	WP_277572157.1	dephospho-CoA kinase	-

Sequence

Protein

• Length: 142 a.a.
• Molecular weight: 14285.44 Da
• Isoelectric Point: 9.1334

>NTDB_id=1038838 ACCP84_RS15740 WP_039587436.1 3650980..3651408(-) (pilA2) [Xanthomonas axonopodis pv. ricini strain NCPPB 2369]
MKKQQGFTLIELMIVVAIIAILAAIALPAYQDYTVRGRVSEAMVAASAAKTVVAENAANGVALNSGWTAPTATNNVTSVA
VDAGSGNITVTTTAKAGGGTIIFAPTAGGAALVSGTVPTDRISWTCTGGTLIAKYRPAECRT

Nucleotide

• Length: 429 bp

>NTDB_id=1038838 ACCP84_RS15740 WP_039587436.1 3650980..3651408(-) (pilA2) [Xanthomonas axonopodis pv. ricini strain NCPPB 2369]
ATGAAGAAGCAACAAGGTTTTACTCTGATCGAACTGATGATCGTTGTCGCGATCATTGCTATTCTGGCGGCCATTGCGTT
GCCGGCTTACCAGGACTATACCGTCCGCGGCCGCGTCTCCGAGGCGATGGTTGCTGCGTCCGCTGCGAAGACGGTTGTGG
CTGAGAACGCCGCCAATGGTGTTGCGCTGAATAGCGGTTGGACTGCTCCCACCGCAACTAACAACGTCACCAGCGTCGCG
GTTGATGCCGGTTCCGGCAATATCACCGTGACCACCACCGCTAAGGCCGGTGGCGGCACCATCATCTTTGCCCCCACGGC
TGGCGGTGCGGCACTGGTCTCTGGCACCGTTCCAACTGATCGTATTTCCTGGACCTGCACGGGCGGCACCCTGATCGCCA
AGTACCGCCCGGCAGAATGCCGTACCTAA

Domains

Predicted by InterproScan.

• Pilin (bacterial filament) (Pilin) (35-141)

• Prokaryotic N-terminal methylation motif (N_methyl) (1-27)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA2	Legionella pneumophila strain ERS1305867	55.556	100	0.563
pilA	Ralstonia pseudosolanacearum GMI1000	50	100	0.563
pilA2	Legionella pneumophila str. Paris	54.861	100	0.556
pilE	Neisseria elongata subsp. glycolytica ATCC 29315	39.378	100	0.535
comP	Acinetobacter baylyi ADP1	47.134	100	0.521
pilA/pilA1	Eikenella corrodens VA1	38.415	100	0.444
pilA/pilAI	Pseudomonas stutzeri DSM 10701	40.541	100	0.423
pilA	Acinetobacter baumannii strain A118	41.135	99.296	0.408
pilA/pilAII	Pseudomonas stutzeri DSM 10701	36.986	100	0.38
pilA	Vibrio cholerae C6706	33.766	100	0.366
pilA	Vibrio cholerae strain A1552	33.766	100	0.366
pilA	Vibrio cholerae O1 biovar El Tor strain E7946	33.766	100	0.366