Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   DQM35_RS02070 Genome accession   NZ_LS483338
Coordinates   362705..362887 (+) Length   60 a.a.
NCBI ID   WP_011184907.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC12064     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 357705..367887
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DQM35_RS02040 (NCTC12064_00400) - 357893..358078 (+) 186 WP_111676573.1 holin -
  DQM35_RS02045 (NCTC12064_00402) - 358189..359394 (+) 1206 WP_111679825.1 glucosaminidase domain-containing protein -
  DQM35_RS02050 (NCTC12064_00403) - 359534..360058 (+) 525 WP_011017840.1 Panacea domain-containing protein -
  DQM35_RS02055 (NCTC12064_00404) - 360046..360912 (+) 867 WP_011888701.1 DUF334 domain-containing protein -
  DQM35_RS02065 (NCTC12064_00406) sda3 361668..362468 (-) 801 WP_011285611.1 streptodornase Sda3 -
  DQM35_RS02070 (NCTC12064_00407) prx 362705..362887 (+) 183 WP_011184907.1 hypothetical protein Regulator
  DQM35_RS02075 (NCTC12064_00408) uvrA 363113..365941 (+) 2829 WP_038431557.1 excinuclease ABC subunit UvrA Machinery gene
  DQM35_RS02080 (NCTC12064_00409) - 366057..367130 (+) 1074 WP_038431556.1 Xaa-Pro peptidase family protein -
  DQM35_RS02085 (NCTC12064_00410) - 367165..367626 (+) 462 WP_002988493.1 deaminase -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6976.99 Da        Isoelectric Point: 4.2550

>NTDB_id=1018447 DQM35_RS02070 WP_011184907.1 362705..362887(+) (prx) [Streptococcus pyogenes strain NCTC12064]
MLTYDEFKQAIDRGYITGDTVMIVRKNGQIFDYVLPHEKVKNGEVVTEEIVEEVMVELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=1018447 DQM35_RS02070 WP_011184907.1 362705..362887(+) (prx) [Streptococcus pyogenes strain NCTC12064]
ATGCTAACATACGACGAGTTTAAACAAGCGATTGACCGTGGATATATCACAGGAGACACAGTTATGATCGTGCGTAAAAA
CGGACAGATTTTTGATTATGTTTTGCCACATGAGAAAGTAAAAAATGGAGAAGTTGTGACCGAGGAGATAGTGGAAGAAG
TGATGGTGGAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

85

100

0.85
  prx Streptococcus pyogenes MGAS8232

85

100

0.85
  prx Streptococcus pyogenes MGAS315

85

100

0.85
  prx Streptococcus pyogenes MGAS315

83.333

100

0.833
  prx Streptococcus pyogenes MGAS315

80

100

0.8
  prx Streptococcus pyogenes MGAS315

88.372

71.667

0.633
  prx Streptococcus pyogenes MGAS315

78.571

70

0.55

Multiple sequence alignment