Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | AAH944_RS05175 | Genome accession | NZ_CP157399 |
| Coordinates | 1022116..1023192 (-) | Length | 358 a.a. |
| NCBI ID | WP_415537057.1 | Uniprot ID | A0A845RTC5 |
| Organism | MAG: Dehalobacter sp. 4CP | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1017116..1028192
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAH944_RS05160 (AAH944_05120) | - | 1017272..1017694 (-) | 423 | WP_415537051.1 | type II secretion system protein | - |
| AAH944_RS05165 (AAH944_05125) | - | 1017906..1020659 (+) | 2754 | WP_415537053.1 | methyl-accepting chemotaxis protein | - |
| AAH944_RS05170 (AAH944_05130) | - | 1020673..1021884 (+) | 1212 | WP_415537055.1 | hypothetical protein | - |
| AAH944_RS05175 (AAH944_05135) | pilT | 1022116..1023192 (-) | 1077 | WP_415537057.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| AAH944_RS05180 (AAH944_05140) | - | 1023228..1024907 (-) | 1680 | WP_415537058.1 | GspE/PulE family protein | - |
| AAH944_RS05185 (AAH944_05145) | - | 1025055..1025720 (+) | 666 | WP_415537060.1 | prepilin peptidase | - |
Sequence
Protein
Download Length: 358 a.a. Molecular weight: 39768.20 Da Isoelectric Point: 6.5011
>NTDB_id=1006638 AAH944_RS05175 WP_415537057.1 1022116..1023192(-) (pilT) [MAG: Dehalobacter sp. 4CP]
MNLNIRDLLLMSLELKASDLHITTGLPPMFRINGILTPMANAKYLSPLDTKELVDELMDEPVKNRLQQKGEVDFSYTIPG
ISRFRVNVYSQRKSMAAAIRVIVPDIPSINELGLPDILKDLSMKPRGLILVTGPTGSGKSTTLAAMVRHMNTHRNSHVIT
IEDPIEYLHAHNQCMINQREIGDDTHTFADALRSALREDPDVILVGEMRDLETINTALMASETGHLVLSTLHTSSAATTI
DRIIDVFPPNQLQQIKVQLASVLQGIICQQLLPTIDGTGRVAAMEALIVNDAVRNMIREGKTHQIDTVIQTGIKVGMAPM
DYSLANLVKRKMVTLEEAKSRCVNPELFSKYLDQPFIF
MNLNIRDLLLMSLELKASDLHITTGLPPMFRINGILTPMANAKYLSPLDTKELVDELMDEPVKNRLQQKGEVDFSYTIPG
ISRFRVNVYSQRKSMAAAIRVIVPDIPSINELGLPDILKDLSMKPRGLILVTGPTGSGKSTTLAAMVRHMNTHRNSHVIT
IEDPIEYLHAHNQCMINQREIGDDTHTFADALRSALREDPDVILVGEMRDLETINTALMASETGHLVLSTLHTSSAATTI
DRIIDVFPPNQLQQIKVQLASVLQGIICQQLLPTIDGTGRVAAMEALIVNDAVRNMIREGKTHQIDTVIQTGIKVGMAPM
DYSLANLVKRKMVTLEEAKSRCVNPELFSKYLDQPFIF
Nucleotide
Download Length: 1077 bp
>NTDB_id=1006638 AAH944_RS05175 WP_415537057.1 1022116..1023192(-) (pilT) [MAG: Dehalobacter sp. 4CP]
ATGAATCTAAATATCAGGGACTTACTTTTAATGTCATTGGAACTGAAAGCTTCTGACCTCCACATCACAACCGGTCTCCC
CCCAATGTTCAGAATCAATGGTATCTTGACTCCGATGGCAAACGCCAAGTATTTGTCTCCGTTGGACACTAAAGAGCTTG
TCGACGAACTGATGGATGAACCCGTGAAAAACCGTTTGCAGCAAAAGGGAGAAGTTGACTTTTCCTATACGATCCCTGGT
ATCAGCCGTTTCAGGGTTAACGTCTACAGCCAACGGAAAAGCATGGCAGCCGCGATCAGGGTCATTGTTCCTGATATTCC
AAGCATAAACGAACTGGGACTTCCCGATATCCTGAAAGACCTCTCGATGAAACCCAGAGGTCTGATCCTGGTCACAGGTC
CGACCGGTTCCGGTAAATCCACTACCCTTGCTGCCATGGTGCGCCATATGAATACGCACCGCAACAGTCACGTCATTACC
ATCGAAGACCCGATCGAATATTTGCATGCCCATAATCAATGCATGATAAACCAGCGTGAGATTGGCGACGATACCCATAC
CTTTGCAGATGCTTTACGGTCTGCACTGCGTGAAGACCCCGATGTTATCCTGGTCGGTGAAATGCGCGACCTTGAGACGA
TCAACACAGCCCTGATGGCTTCAGAAACAGGCCACCTGGTCTTGTCCACGCTCCATACTTCATCCGCAGCGACTACTATT
GACCGGATCATCGATGTCTTTCCGCCGAATCAGCTGCAGCAGATTAAAGTTCAGCTGGCATCTGTTCTTCAGGGCATTAT
CTGCCAGCAGCTGCTGCCTACTATTGATGGCACCGGACGTGTTGCAGCGATGGAAGCTCTCATCGTCAATGACGCTGTCC
GGAATATGATCCGCGAAGGCAAGACCCACCAGATTGACACAGTTATTCAGACTGGCATCAAAGTCGGTATGGCCCCGATG
GATTATTCCCTGGCGAATCTGGTCAAACGGAAGATGGTAACCCTAGAGGAAGCAAAATCGAGATGTGTGAATCCTGAATT
GTTCTCGAAGTATCTTGATCAGCCGTTTATTTTCTAA
ATGAATCTAAATATCAGGGACTTACTTTTAATGTCATTGGAACTGAAAGCTTCTGACCTCCACATCACAACCGGTCTCCC
CCCAATGTTCAGAATCAATGGTATCTTGACTCCGATGGCAAACGCCAAGTATTTGTCTCCGTTGGACACTAAAGAGCTTG
TCGACGAACTGATGGATGAACCCGTGAAAAACCGTTTGCAGCAAAAGGGAGAAGTTGACTTTTCCTATACGATCCCTGGT
ATCAGCCGTTTCAGGGTTAACGTCTACAGCCAACGGAAAAGCATGGCAGCCGCGATCAGGGTCATTGTTCCTGATATTCC
AAGCATAAACGAACTGGGACTTCCCGATATCCTGAAAGACCTCTCGATGAAACCCAGAGGTCTGATCCTGGTCACAGGTC
CGACCGGTTCCGGTAAATCCACTACCCTTGCTGCCATGGTGCGCCATATGAATACGCACCGCAACAGTCACGTCATTACC
ATCGAAGACCCGATCGAATATTTGCATGCCCATAATCAATGCATGATAAACCAGCGTGAGATTGGCGACGATACCCATAC
CTTTGCAGATGCTTTACGGTCTGCACTGCGTGAAGACCCCGATGTTATCCTGGTCGGTGAAATGCGCGACCTTGAGACGA
TCAACACAGCCCTGATGGCTTCAGAAACAGGCCACCTGGTCTTGTCCACGCTCCATACTTCATCCGCAGCGACTACTATT
GACCGGATCATCGATGTCTTTCCGCCGAATCAGCTGCAGCAGATTAAAGTTCAGCTGGCATCTGTTCTTCAGGGCATTAT
CTGCCAGCAGCTGCTGCCTACTATTGATGGCACCGGACGTGTTGCAGCGATGGAAGCTCTCATCGTCAATGACGCTGTCC
GGAATATGATCCGCGAAGGCAAGACCCACCAGATTGACACAGTTATTCAGACTGGCATCAAAGTCGGTATGGCCCCGATG
GATTATTCCCTGGCGAATCTGGTCAAACGGAAGATGGTAACCCTAGAGGAAGCAAAATCGAGATGTGTGAATCCTGAATT
GTTCTCGAAGTATCTTGATCAGCCGTTTATTTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
49.148 |
98.324 |
0.483 |
| pilT | Neisseria meningitidis 8013 |
48.991 |
96.927 |
0.475 |
| pilT | Acinetobacter baylyi ADP1 |
48.844 |
96.648 |
0.472 |
| pilT | Acinetobacter baumannii strain A118 |
48.844 |
96.648 |
0.472 |
| pilT | Acinetobacter baumannii D1279779 |
48.844 |
96.648 |
0.472 |
| pilT | Acinetobacter nosocomialis M2 |
48.844 |
96.648 |
0.472 |
| pilT | Neisseria gonorrhoeae MS11 |
48.703 |
96.927 |
0.472 |
| pilT | Pseudomonas aeruginosa PAK |
47.564 |
97.486 |
0.464 |
| pilT | Vibrio cholerae strain A1552 |
48.673 |
94.693 |
0.461 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
48.673 |
94.693 |
0.461 |
| pilT | Legionella pneumophila strain Lp02 |
46.418 |
97.486 |
0.453 |
| pilT | Legionella pneumophila strain ERS1305867 |
46.418 |
97.486 |
0.453 |
| pilT | Pseudomonas stutzeri DSM 10701 |
46.132 |
97.486 |
0.45 |
| pilU | Pseudomonas stutzeri DSM 10701 |
41.369 |
93.855 |
0.388 |
| pilU | Acinetobacter baylyi ADP1 |
40.116 |
96.089 |
0.385 |