NC_012667932253..1057432

MGE detailed information

MGE type: Genomic_island        MGE length: 125180 bp
Accession: NC_012667        Location: 932253..1057432         Organism: Vibrio cholerae MJ-1236       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
VCD_RS18700 () 927325..930102 - 2778 WP_000509636.1 alkaline phosphatase family protein -
VCD_RS18715 () 932253..932666 - 414 WP_000049423.1 VOC family protein -
VCD_RS18720 () 932850..933365 - 516 WP_000343779.1 dTDP-fucosamine acetyltransferase VF
VCD_RS18725 () 933559..933843 + 285 WP_000381183.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin Detail
VCD_RS18730 () 933840..934118 + 279 WP_000578476.1 type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family Toxin Detail
VCD_RS18735 () 934257..934652 - 396 WP_001000867.1 hypothetical protein -
VCD_RS20685 () 934903..935028 - 126 WP_001905700.1 DUF645 family protein -
VCD_RS18745 () 935327..935848 - 522 WP_000921691.1 DUF2442 domain-containing protein Antitoxin Detail
VCD_RS18750 () 935842..936111 - 270 WP_001114075.1 DUF4160 domain-containing protein Toxin Detail
VCD_RS20880 () 936142..936246 - 105 WP_099607150.1 acetyltransferase Antitoxin Detail
VCD_RS18755 () 936303..936902 - 600 WP_001891245.1 glutathione S-transferase N-terminal domain-containing protein -
VCD_RS18760 () 937052..937924 - 873 WP_000254716.1 DUF3800 domain-containing protein -
VCD_RS18765 () 938099..938317 - 219 WP_071908318.1 GNAT family N-acetyltransferase -
VCD_RS18770 () 938381..938818 - 438 WP_000503169.1 IS200-IS605 family transposase IS1004 Transposase
VCD_RS18775 () 938937..939146 - 210 Protein_805 GNAT family N-acetyltransferase -
VCD_RS18780 () 939442..939936 + 495 WP_000477436.1 hypothetical protein -
VCD_RS18790 () 940254..941912 + 1659 WP_001125479.1 recombinase family protein -
VCD_RS18800 () 942411..942803 - 393 WP_001050346.1 hypothetical protein -
VCD_RS18805 () 942803..943177 - 375 WP_000917367.1 hypothetical protein -
VCD_RS18810 () 943198..943485 - 288 WP_000130749.1 hypothetical protein -
VCD_RS18815 () 945976..946689 + 714 WP_001164594.1 helix-turn-helix domain-containing protein -
VCD_RS18820 () 947060..947296 + 237 WP_000873011.1 hypothetical protein -
VCD_RS18825 () 947303..947485 + 183 WP_000701627.1 hypothetical protein -
VCD_RS18830 () 947463..948503 + 1041 WP_000033350.1 hypothetical protein -
VCD_RS18835 () 948589..949440 + 852 WP_000011023.1 hypothetical protein -
VCD_RS21050 () 949576..949734 + 159 WP_000873378.1 hypothetical protein -
VCD_RS21055 () 949816..949962 + 147 WP_000284327.1 hypothetical protein -
VCD_RS18840 () 950111..950833 + 723 WP_000138495.1 hypothetical protein -
VCD_RS18845 () 950837..951136 + 300 WP_000283749.1 hypothetical protein -
VCD_RS18850 () 951581..952057 + 477 WP_001147213.1 hypothetical protein -
VCD_RS18855 () 952070..952291 + 222 WP_000628296.1 hypothetical protein -
VCD_RS18860 () 952291..953058 + 768 WP_001902294.1 hypothetical protein -
VCD_RS18865 () 953147..954022 + 876 WP_000214174.1 hypothetical protein -
VCD_RS18870 () 954090..954293 + 204 WP_032471619.1 hypothetical protein -
VCD_RS18875 () 954305..954781 + 477 WP_000877544.1 hypothetical protein -
VCD_RS18880 () 954991..955332 + 342 WP_002027243.1 hypothetical protein -
VCD_RS18885 () 955642..955977 + 336 WP_000978439.1 hypothetical protein -
VCD_RS18890 () 955974..957722 + 1749 WP_000063385.1 hypothetical protein -
VCD_RS18895 () 957722..958180 + 459 WP_001176612.1 hypothetical protein -
VCD_RS18900 () 958376..958765 - 390 WP_001081302.1 hypothetical protein -
VCD_RS18905 () 958922..959839 - 918 WP_000186333.1 alpha/beta hydrolase -
VCD_RS18910 () 960073..960375 - 303 WP_000229317.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
VCD_RS18915 () 960363..960620 - 258 WP_000861987.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
VCD_RS18920 () 960822..961355 - 534 WP_000118351.1 GNAT family N-acetyltransferase Toxin Detail
VCD_RS21060 () 961352..961777 - 426 WP_001882332.1 DUF1778 domain-containing protein Antitoxin Detail
VCD_RS18930 () 961844..962215 - 372 WP_001164080.1 nucleotide pyrophosphohydrolase -
VCD_RS18935 () 962356..962643 - 288 WP_000426470.1 hypothetical protein -
VCD_RS18940 () 962795..963463 - 669 WP_000043871.1 hypothetical protein -
VCD_RS18945 () 963694..963966 + 273 WP_000246253.1 DUF1778 domain-containing protein Antitoxin Detail
VCD_RS18950 () 963963..964460 + 498 WP_000982260.1 GNAT family N-acetyltransferase Toxin Detail
VCD_RS18955 () 964662..964814 - 153 WP_001884520.1 DUF645 family protein -
VCD_RS18960 () 965136..965591 - 456 WP_001245327.1 GNAT family N-acetyltransferase -
VCD_RS18965 () 965719..966006 - 288 WP_000221354.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
VCD_RS18970 () 965996..966247 - 252 WP_001250179.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
VCD_RS18975 () 966461..966874 - 414 WP_000049417.1 VOC family protein -
VCD_RS20710 () 966949..967092 - 144 WP_071908341.1 DUF3265 domain-containing protein -
VCD_RS18980 () 967062..967463 - 402 WP_000351248.1 type II toxin-antitoxin system death-on-curing family toxin Toxin Detail
VCD_RS18985 () 967463..968155 - 693 WP_001047169.1 GNAT family N-acetyltransferase Antitoxin Detail
VCD_RS18990 () 968292..968598 - 307 Protein_849 Streptogramin A acetyltransferase VF
VCD_RS18995 () 968666..969646 + 981 WP_000019370.1 IS5 family transposase ISVch5 Transposase
VCD_RS19000 () 969771..969926 - 156 WP_000751734.1 hypothetical protein -
VCD_RS19005 () 970094..970528 - 435 WP_000256036.1 GNAT family N-acetyltransferase -
VCD_RS19010 () 970665..970979 - 315 WP_000071008.1 DNA-binding transcriptional regulator Antitoxin Detail
VCD_RS19015 () 970966..971298 - 333 WP_000843587.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
VCD_RS20360 () 971639..971866 - 228 WP_001894457.1 DUF1289 domain-containing protein -
VCD_RS20365 () 971815..971928 - 114 WP_001889158.1 hypothetical protein -
VCD_RS20380 () 972094..972375 - 282 WP_001894453.1 DUF1289 domain-containing protein -
VCD_RS21065 () 972324..972438 - 115 Protein_858 acetyltransferase -
VCD_RS19025 () 972495..972872 - 378 WP_000411109.1 hypothetical protein -
VCD_RS19030 () 973043..973285 - 243 WP_000107461.1 hypothetical protein -
VCD_RS19035 () 973487..973873 - 387 WP_000703163.1 VOC family protein -
VCD_RS20385 () 974082..974253 - 172 Protein_862 DUF645 family protein -
VCD_RS19040 () 974571..974840 - 270 WP_001198131.1 hypothetical protein -
VCD_RS20885 () 975200..975373 - 174 WP_001882305.1 DUF3709 domain-containing protein -
VCD_RS21070 () 975654..975857 - 204 WP_001911745.1 hypothetical protein -
VCD_RS19050 () 976144..976695 - 552 WP_000821930.1 hypothetical protein -
VCD_RS19055 () 976851..977708 - 858 WP_001279526.1 DUF2806 domain-containing protein -
VCD_RS19060 () 977855..978469 - 615 WP_000789575.1 hypothetical protein -
VCD_RS20410 () 978792..978962 - 171 WP_001882300.1 DUF645 family protein -
VCD_RS19065 () 979266..979844 - 579 WP_001020575.1 DJ-1/PfpI family protein -
VCD_RS19070 () 980095..981080 + 986 Protein_871 Sulfate-binding protein VF
VCD_RS19075 () 981463..981927 + 465 WP_000140244.1 hypothetical protein -
VCD_RS19080 () 982027..982425 - 399 WP_001882293.1 hypothetical protein -
VCD_RS19085 () 982581..983081 - 501 WP_000789723.1 hypothetical protein -
VCD_RS19090 () 983219..983749 - 531 WP_000415563.1 hypothetical protein -
VCD_RS19095 () 983900..984295 - 396 WP_000649527.1 DUF3465 domain-containing protein -
VCD_RS19100 () 984503..984928 - 426 WP_000415748.1 hypothetical protein -
VCD_RS19105 () 985200..985853 - 654 WP_000036957.1 site-specific DNA-methyltransferase -
VCD_RS19120 () 986424..986672 + 249 WP_000213183.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
VCD_RS19125 () 986662..986952 + 291 WP_000221352.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
VCD_RS19130 () 987088..987603 - 516 WP_001201528.1 lipocalin family protein -
VCD_RS19135 () 987740..988216 - 477 WP_001047180.1 GNAT family N-acetyltransferase -
VCD_RS20725 () 988244..988354 - 111 WP_071917832.1 DUF3265 domain-containing protein -
VCD_RS19140 () 988351..989280 - 930 WP_000335802.1 hypothetical protein -
VCD_RS19145 () 989400..989846 - 447 WP_000128977.1 hypothetical protein -
VCD_RS19150 () 989999..991003 - 1005 WP_000964925.1 LD-carboxypeptidase -
VCD_RS20895 () 991216..991254 - 39 WP_106019119.1 hypothetical protein -
VCD_RS20430 () 991270..991395 - 126 WP_001944767.1 DUF645 family protein -
VCD_RS21075 () 991572..991682 - 111 WP_134814058.1 DUF3265 domain-containing protein -
VCD_RS19160 () 991679..991996 - 318 WP_001232701.1 HigA family addiction module antidote protein Antitoxin Detail
VCD_RS19165 () 992007..992294 - 288 WP_001162670.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
VCD_RS19170 () 992561..992741 - 181 Protein_892 DUF645 family protein -
VCD_RS20440 () 993166..993399 - 234 WP_032482776.1 DUF3709 domain-containing protein -
VCD_RS19175 () 993802..994020 - 219 WP_001917086.1 DUF3709 domain-containing protein -
VCD_RS19180 () 994330..994983 - 654 WP_000226874.1 hypothetical protein -
VCD_RS19185 () 995040..995549 - 510 WP_000405987.1 GNAT family N-acetyltransferase -
VCD_RS19190 () 995791..996033 + 243 WP_000557292.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
VCD_RS19195 () 996052..996369 + 318 WP_001180243.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
VCD_RS21080 () 996563..996658 - 96 WP_001907607.1 DUF645 family protein -
VCD_RS20905 () 997014..997307 - 294 WP_125460920.1 hypothetical protein -
VCD_RS19200 () 997454..997801 - 348 WP_000933409.1 hypothetical protein -
VCD_RS19205 () 997950..998375 - 426 WP_000403014.1 GNAT family N-acetyltransferase -
VCD_RS19210 () 998571..998750 - 180 WP_001883039.1 DUF645 family protein -
VCD_RS19220 () 999047..999583 - 537 WP_000644491.1 nucleotidyltransferase family protein -
VCD_RS19225 () 999727..1000122 - 396 WP_000046953.1 hypothetical protein -
VCD_RS20460 () 1000299..1000480 - 182 Protein_906 DUF645 family protein -
VCD_RS19230 () 1000783..1001178 - 396 WP_000046952.1 hypothetical protein -
VCD_RS19235 () 1001431..1001709 - 279 WP_000280319.1 DUF3709 domain-containing protein -
VCD_RS20915 () 1001827..1001937 - 111 Protein_909 DUF3265 domain-containing protein -
VCD_RS19240 () 1001934..1002941 - 1008 WP_000093800.1 DUF4365 domain-containing protein -
VCD_RS19250 () 1003359..1004536 + 1178 WP_086010879.1 IS3 family transposase ISVch4 Transposase
VCD_RS19255 () 1004533..1005228 + 696 WP_000213836.1 hypothetical protein -
VCD_RS19260 () 1005289..1005795 - 507 WP_001921103.1 hypothetical protein -
VCD_RS19265 () 1005836..1006858 - 1023 WP_000954291.1 hypothetical protein -
VCD_RS20470 () 1006970..1007110 - 141 WP_001883049.1 DUF3265 domain-containing protein -
VCD_RS19270 () 1007076..1008011 - 936 WP_000051985.1 restriction endonuclease -
VCD_RS19275 () 1008292..1008891 - 600 WP_000429495.1 hypothetical protein -
VCD_RS19280 () 1009046..1009312 - 267 WP_000937852.1 hypothetical protein -
VCD_RS19285 () 1009526..1010209 - 684 WP_000877436.1 hypothetical protein -
VCD_RS20480 () 1010633..1010725 - 93 WP_014164112.1 DUF3265 domain-containing protein -
VCD_RS19815 () 1010747..1011325 - 579 WP_000110120.1 hypothetical protein -
VCD_RS19300 () 1011554..1011796 + 243 WP_001107719.1 type II toxin-antitoxin system ParD family antitoxin Antitoxin Detail
VCD_RS19305 () 1011793..1012092 + 300 WP_000802136.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
VCD_RS19310 () 1012220..1012615 - 396 WP_000870857.1 DUF3465 domain-containing protein -
VCD_RS19315 () 1012829..1013008 - 180 WP_001883058.1 DUF645 family protein -
VCD_RS20490 () 1013586..1013696 - 111 WP_079857360.1 DUF3265 domain-containing protein -
VCD_RS19325 () 1013706..1014404 - 699 WP_001890502.1 hypothetical protein -
VCD_RS19330 () 1014527..1015153 - 627 WP_000365424.1 LysE family translocator -
VCD_RS20495 () 1015195..1015287 - 93 WP_014378730.1 DUF3265 domain-containing protein -
VCD_RS19335 () 1015302..1015775 - 474 WP_001161076.1 GrpB family protein -
VCD_RS19340 () 1015975..1016157 - 183 WP_000923182.1 DUF645 family protein -
VCD_RS19345 () 1016549..1017145 - 597 WP_000255434.1 hypothetical protein -
VCD_RS19350 () 1017210..1017725 - 516 WP_001201520.1 lipocalin family protein -
VCD_RS19355 () 1017920..1018204 + 285 WP_000381183.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin Detail
VCD_RS19360 () 1018201..1018479 + 279 WP_000578476.1 type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family Toxin Detail
VCD_RS19365 () 1018630..1019043 - 414 WP_000049420.1 VOC family protein -
VCD_RS19370 () 1019231..1019710 - 480 WP_000009888.1 lecithin retinol acyltransferase family protein -
VCD_RS19375 () 1019923..1020546 - 624 WP_000247070.1 DUF1349 domain-containing protein -
VCD_RS19380 () 1020752..1021177 - 426 WP_000415750.1 hypothetical protein -
VCD_RS20510 () 1021324..1021473 - 150 WP_071908333.1 DUF3265 domain-containing protein -
VCD_RS19385 () 1021446..1021697 - 252 WP_001890111.1 TIGR03643 family protein -
VCD_RS19390 () 1021892..1022095 - 204 WP_001911580.1 hypothetical protein -
VCD_RS19395 () 1022352..1022738 - 387 WP_000703163.1 VOC family protein -
VCD_RS19400 () 1022895..1023401 - 507 WP_000393074.1 hypothetical protein -
VCD_RS19405 () 1023669..1023902 - 234 WP_001890112.1 DUF3709 domain-containing protein -
VCD_RS19410 () 1024175..1024534 - 360 WP_001071541.1 VOC family protein -
VCD_RS19415 () 1024687..1025691 - 1005 WP_000964920.1 LD-carboxypeptidase -
VCD_RS19420 () 1025907..1026089 - 183 WP_000923182.1 DUF645 family protein -
VCD_RS21085 () 1026150..1026278 - 129 WP_071908338.1 general secretion pathway protein GspI -
VCD_RS19425 () 1026381..1027175 - 795 WP_001911581.1 hypothetical protein -
VCD_RS19430 () 1027271..1027516 - 246 WP_000643598.1 hypothetical protein Antitoxin Detail
VCD_RS19435 () 1027503..1027769 - 267 WP_000589156.1 BrnT family toxin Toxin Detail
VCD_RS19440 () 1027954..1028616 - 663 WP_000960654.1 hypothetical protein -
VCD_RS19445 () 1028744..1029211 - 468 WP_001289288.1 OsmC family protein -
VCD_RS21090 () 1029423..1029461 - 39 WP_082798268.1 hypothetical protein -
VCD_RS21095 () 1029515..1029658 - 144 Protein_956 DUF645 family protein -
VCD_RS19455 () 1030033..1030311 - 279 WP_000280324.1 DUF3709 domain-containing protein -
VCD_RS19460 () 1030563..1030805 - 243 WP_000107461.1 hypothetical protein -
VCD_RS20550 () 1030897..1031046 - 150 WP_071908333.1 DUF3265 domain-containing protein -
VCD_RS19465 () 1031019..1031270 - 252 WP_001890111.1 TIGR03643 family protein -
VCD_RS19470 () 1031465..1031851 - 387 WP_000703163.1 VOC family protein -
VCD_RS20935 () 1031841..1031942 - 102 WP_001921603.1 hypothetical protein -
VCD_RS20940 () 1032142..1032348 - 207 Protein_963 DUF3709 domain-containing protein -
VCD_RS20560 () 1032600..1032878 - 279 WP_001921601.1 DUF3709 domain-containing protein -
VCD_RS19480 () 1033164..1033442 + 279 WP_001258569.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin Detail
VCD_RS19485 () 1033435..1033704 + 270 WP_000277238.1 type II toxin-antitoxin system YafQ family toxin Toxin Detail
VCD_RS19490 () 1033852..1034298 - 447 WP_000006157.1 hypothetical protein -
VCD_RS20945 () 1034494..1034532 - 39 WP_106019118.1 hypothetical protein -
VCD_RS20795 () 1034548..1034673 - 126 WP_001900195.1 DUF645 family protein -
VCD_RS19500 () 1035066..1035338 + 273 WP_000246253.1 DUF1778 domain-containing protein Antitoxin Detail
VCD_RS19505 () 1035335..1035832 + 498 WP_000982260.1 GNAT family N-acetyltransferase Toxin Detail
VCD_RS19510 () 1035982..1036497 - 516 WP_001201509.1 lipocalin family protein -
VCD_RS19515 () 1036634..1037170 - 537 WP_000469482.1 GNAT family N-acetyltransferase -
VCD_RS19525 () 1037428..1037709 - 282 WP_001894429.1 DUF1289 domain-containing protein -
VCD_RS20575 () 1037658..1037771 - 114 WP_001900214.1 hypothetical protein -
VCD_RS19530 () 1037828..1038214 - 387 WP_001015867.1 NUDIX hydrolase -
VCD_RS19535 () 1038458..1038700 + 243 WP_000557292.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
VCD_RS19540 () 1038719..1039036 + 318 WP_001180243.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
VCD_RS19545 () 1039190..1039528 - 339 WP_000713853.1 hypothetical protein -
VCD_RS19550 () 1039686..1040390 - 705 WP_000087610.1 HNH endonuclease -
VCD_RS19555 () 1040552..1041760 - 1209 WP_000272282.1 deoxyguanosinetriphosphate triphosphohydrolase family protein -
VCD_RS19560 () 1041922..1042599 - 678 WP_000254617.1 HNH endonuclease -
VCD_RS19565 () 1042794..1042976 - 183 WP_000923153.1 DUF645 family protein -
VCD_RS19575 () 1043330..1043512 - 183 WP_000923340.1 DUF645 family protein -
VCD_RS19580 () 1043808..1044185 - 378 WP_000411106.1 hypothetical protein -
VCD_RS19585 () 1044390..1044572 - 183 WP_000923334.1 DUF645 family protein -
VCD_RS20585 () 1044597..1044776 - 180 WP_001203705.1 hypothetical protein -
VCD_RS19590 () 1044874..1045626 - 753 WP_000116045.1 putative oxidoreductase YgfF VF
VCD_RS19595 () 1045782..1046411 - 630 WP_001009012.1 Chloramphenicol acetyltransferase VF
VCD_RS19600 () 1046562..1046993 - 432 WP_000795498.1 hypothetical protein -
VCD_RS20590 () 1047024..1047173 - 150 WP_071908333.1 DUF3265 domain-containing protein -
VCD_RS19605 () 1047146..1047397 - 252 WP_001890111.1 TIGR03643 family protein -
VCD_RS19610 () 1047653..1047835 - 183 WP_000923182.1 DUF645 family protein -
VCD_RS21100 () 1048499..1048588 - 90 WP_072615218.1 DUF3265 domain-containing protein -
VCD_RS19620 () 1048632..1048958 - 327 WP_001921550.1 hypothetical protein -
VCD_RS20605 () 1048987..1049154 - 168 WP_001883086.1 DUF3265 domain-containing protein -
VCD_RS19625 () 1049634..1050596 + 963 WP_000841995.1 IS91 family transposase ISAzo26 Transposase
VCD_RS19630 () 1050678..1051031 - 354 WP_001138366.1 50S ribosomal protein L20 -
VCD_RS19635 () 1051073..1051267 - 195 WP_001885060.1 50S ribosomal protein L35 -
VCD_RS19640 () 1051371..1051922 - 552 WP_001894072.1 translation initiation factor IF-3 -
VCD_RS19645 () 1051926..1053854 - 1929 WP_001121779.1 threonine--tRNA ligase -
VCD_RS21105 () 1054123..1054350 - 228 WP_001911595.1 hypothetical protein -
VCD_RS19655 () 1054475..1055146 - 672 WP_000132861.1 hypothetical protein -
VCD_RS19660 () 1055146..1055676 - 531 WP_000237645.1 type VI secretion system PAAR protein -
VCD_RS19665 () 1056197..1057450 - 1254 WP_012725034.1 hypothetical protein -
VCD_RS19670 () 1057726..1058706 - 981 WP_000019370.1 IS5-like element ISVch5 family transposase -
VCD_RS19675 () 1058752..1059903 - 1152 WP_001018595.1 site-specific integrase -
VCD_RS19680 () 1060376..1061506 - 1131 WP_000139209.1 glycine cleavage system aminomethyltransferase GcvT -
VCD_RS19685 () 1061750..1062373 - 624 WP_001287804.1 XRE family transcriptional regulator -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance