Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | AAHC66_RS22200 | Genome accession | NZ_CP155078 |
| Coordinates | 4612777..4613883 (+) | Length | 368 a.a. |
| NCBI ID | WP_002742598.1 | Uniprot ID | A0AB33BRR3 |
| Organism | Microcystis aeruginosa PCC 7806 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4607777..4618883
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAHC66_RS22185 | - | 4608910..4609551 (+) | 642 | WP_002742601.1 | HAD-IA family hydrolase | - |
| AAHC66_RS22190 | grpE | 4609646..4610368 (-) | 723 | WP_002742600.1 | nucleotide exchange factor GrpE | - |
| AAHC66_RS22195 | pilB/pilB1 | 4610609..4612624 (+) | 2016 | WP_002742599.1 | GspE/PulE family protein | Machinery gene |
| AAHC66_RS22200 | pilT | 4612777..4613883 (+) | 1107 | WP_002742598.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| AAHC66_RS22205 | - | 4614024..4615238 (+) | 1215 | WP_036400185.1 | type II secretion system F family protein | - |
| AAHC66_RS22210 | - | 4615459..4618029 (-) | 2571 | WP_004156918.1 | TIGR03960 family B12-binding radical SAM protein | - |
Sequence
Protein
Download Length: 368 a.a. Molecular weight: 40593.94 Da Isoelectric Point: 7.8137
>NTDB_id=996158 AAHC66_RS22200 WP_002742598.1 4612777..4613883(+) (pilT) [Microcystis aeruginosa PCC 7806]
MELMIEDLMEQLVEMGGSDMHIQSRAPVYFRISGKLIPINEKSLTPQDCQKLIFSMLNNTQIKELEQNWELDCSYGVKGL
ARFRINVYKERGAYAACLRALSSKMPNFEQLNLPAVIRELSERPRGLILVTGQTGSGKTTTLAAILDLINRTSSEHILTV
EDPIEYVFPNIKSLFHQRQKGEDTKSFANALRSALREDPDIILVGEMRDLETISLAITAAETGHLVFGTLHTSSAAGTVD
RIIDVFPANQQAQIRAMLSNSLLAVFSQNLVKKKNPKPGEFGRAMVQEIMVVTPAIANLIREGKAPQVYSAIQTGMKLGM
QTMEQGLANLVVSGVISFEEAISKSSKPDELQRLVAGSVANAKTKARF
MELMIEDLMEQLVEMGGSDMHIQSRAPVYFRISGKLIPINEKSLTPQDCQKLIFSMLNNTQIKELEQNWELDCSYGVKGL
ARFRINVYKERGAYAACLRALSSKMPNFEQLNLPAVIRELSERPRGLILVTGQTGSGKTTTLAAILDLINRTSSEHILTV
EDPIEYVFPNIKSLFHQRQKGEDTKSFANALRSALREDPDIILVGEMRDLETISLAITAAETGHLVFGTLHTSSAAGTVD
RIIDVFPANQQAQIRAMLSNSLLAVFSQNLVKKKNPKPGEFGRAMVQEIMVVTPAIANLIREGKAPQVYSAIQTGMKLGM
QTMEQGLANLVVSGVISFEEAISKSSKPDELQRLVAGSVANAKTKARF
Nucleotide
Download Length: 1107 bp
>NTDB_id=996158 AAHC66_RS22200 WP_002742598.1 4612777..4613883(+) (pilT) [Microcystis aeruginosa PCC 7806]
ATGGAATTAATGATCGAAGATTTAATGGAACAATTGGTCGAGATGGGCGGTTCCGATATGCACATTCAGTCCCGTGCGCC
GGTCTATTTTCGCATTAGTGGCAAACTCATCCCGATTAATGAAAAATCTTTAACCCCGCAAGATTGTCAGAAATTGATTT
TTAGTATGCTCAATAATACTCAAATAAAAGAGTTAGAGCAGAATTGGGAATTAGACTGTTCATACGGGGTGAAAGGATTA
GCAAGATTTAGGATCAATGTTTATAAAGAAAGGGGAGCCTATGCAGCTTGTTTACGCGCTTTGTCCTCTAAAATGCCTAA
CTTTGAACAATTAAATTTACCAGCAGTGATCCGAGAATTATCGGAAAGACCGAGGGGATTAATTCTCGTAACTGGCCAAA
CAGGTTCAGGTAAAACTACCACTTTAGCGGCAATTTTAGACTTAATTAATCGGACTAGTTCTGAACATATTTTGACTGTA
GAAGACCCAATTGAATACGTTTTTCCTAATATAAAAAGCCTGTTTCACCAACGACAAAAAGGAGAAGATACCAAGAGTTT
TGCTAACGCATTAAGATCAGCGTTACGAGAAGACCCTGATATTATCCTTGTGGGAGAAATGCGGGATTTAGAAACAATTA
GTTTGGCAATTACGGCGGCGGAAACCGGTCACTTAGTCTTCGGAACCCTACACACTAGCTCGGCAGCGGGAACAGTGGAT
CGGATTATTGACGTTTTCCCCGCTAACCAACAGGCACAAATTCGCGCCATGTTATCCAATTCTTTACTAGCAGTTTTTAG
TCAAAACCTAGTCAAGAAAAAAAATCCCAAACCGGGGGAATTTGGCCGGGCAATGGTACAGGAAATCATGGTGGTAACTC
CAGCGATCGCCAACCTAATTCGCGAAGGAAAAGCCCCCCAAGTTTACTCGGCAATTCAAACGGGAATGAAGCTAGGAATG
CAAACTATGGAACAGGGATTAGCTAATTTAGTTGTTAGCGGTGTTATATCCTTTGAAGAGGCAATTTCTAAAAGTAGTAA
ACCCGATGAATTACAACGTCTGGTCGCTGGGTCCGTTGCTAACGCCAAAACTAAAGCCCGTTTCTAA
ATGGAATTAATGATCGAAGATTTAATGGAACAATTGGTCGAGATGGGCGGTTCCGATATGCACATTCAGTCCCGTGCGCC
GGTCTATTTTCGCATTAGTGGCAAACTCATCCCGATTAATGAAAAATCTTTAACCCCGCAAGATTGTCAGAAATTGATTT
TTAGTATGCTCAATAATACTCAAATAAAAGAGTTAGAGCAGAATTGGGAATTAGACTGTTCATACGGGGTGAAAGGATTA
GCAAGATTTAGGATCAATGTTTATAAAGAAAGGGGAGCCTATGCAGCTTGTTTACGCGCTTTGTCCTCTAAAATGCCTAA
CTTTGAACAATTAAATTTACCAGCAGTGATCCGAGAATTATCGGAAAGACCGAGGGGATTAATTCTCGTAACTGGCCAAA
CAGGTTCAGGTAAAACTACCACTTTAGCGGCAATTTTAGACTTAATTAATCGGACTAGTTCTGAACATATTTTGACTGTA
GAAGACCCAATTGAATACGTTTTTCCTAATATAAAAAGCCTGTTTCACCAACGACAAAAAGGAGAAGATACCAAGAGTTT
TGCTAACGCATTAAGATCAGCGTTACGAGAAGACCCTGATATTATCCTTGTGGGAGAAATGCGGGATTTAGAAACAATTA
GTTTGGCAATTACGGCGGCGGAAACCGGTCACTTAGTCTTCGGAACCCTACACACTAGCTCGGCAGCGGGAACAGTGGAT
CGGATTATTGACGTTTTCCCCGCTAACCAACAGGCACAAATTCGCGCCATGTTATCCAATTCTTTACTAGCAGTTTTTAG
TCAAAACCTAGTCAAGAAAAAAAATCCCAAACCGGGGGAATTTGGCCGGGCAATGGTACAGGAAATCATGGTGGTAACTC
CAGCGATCGCCAACCTAATTCGCGAAGGAAAAGCCCCCCAAGTTTACTCGGCAATTCAAACGGGAATGAAGCTAGGAATG
CAAACTATGGAACAGGGATTAGCTAATTTAGTTGTTAGCGGTGTTATATCCTTTGAAGAGGCAATTTCTAAAAGTAGTAA
ACCCGATGAATTACAACGTCTGGTCGCTGGGTCCGTTGCTAACGCCAAAACTAAAGCCCGTTTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
51.297 |
94.293 |
0.484 |
| pilT | Legionella pneumophila strain Lp02 |
51.594 |
93.75 |
0.484 |
| pilT | Legionella pneumophila strain ERS1305867 |
51.594 |
93.75 |
0.484 |
| pilT | Pseudomonas stutzeri DSM 10701 |
50.432 |
94.293 |
0.476 |
| pilT | Acinetobacter nosocomialis M2 |
50.432 |
94.293 |
0.476 |
| pilT | Acinetobacter baumannii D1279779 |
50.432 |
94.293 |
0.476 |
| pilT | Acinetobacter baumannii strain A118 |
50.432 |
94.293 |
0.476 |
| pilT | Acinetobacter baylyi ADP1 |
49.856 |
94.293 |
0.47 |
| pilT | Vibrio cholerae strain A1552 |
49.706 |
92.391 |
0.459 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
49.706 |
92.391 |
0.459 |
| pilT | Neisseria meningitidis 8013 |
49.263 |
92.12 |
0.454 |
| pilT | Neisseria gonorrhoeae MS11 |
48.968 |
92.12 |
0.451 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
44.571 |
95.109 |
0.424 |