Detailed information NTG0966197

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: NYE32_RS09550
• Genome accession: NZ_CP150201
• Coordinates: 2059013..2059339 (-)
• Length: 108 a.a.
• NCBI ID: WP_070576715.1
• Uniprot ID: -
• Organism: Streptococcus sp. FSL R7-0248
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2054013..2064339

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NYE32_RS09510 (NYE32_09510)	-	2054277..2054933 (-)	657	WP_064523497.1	type II CAAX endopeptidase family protein	-
NYE32_RS09515 (NYE32_09515)	-	2054945..2055142 (-)	198	WP_013991261.1	helix-turn-helix transcriptional regulator	-
NYE32_RS09520 (NYE32_09520)	-	2055393..2056586 (-)	1194	WP_073689934.1	acetate kinase	-
NYE32_RS09525 (NYE32_09525)	comYH	2056643..2057599 (-)	957	WP_073689935.1	class I SAM-dependent methyltransferase	Machinery gene
NYE32_RS09530 (NYE32_09530)	comGG	2057644..2057961 (-)	318	WP_060973072.1	competence type IV pilus minor pilin ComGG	-
NYE32_RS09535 (NYE32_09535)	comYF	2057939..2058376 (-)	438	WP_037600123.1	competence type IV pilus minor pilin ComGF	Machinery gene
NYE32_RS09540 (NYE32_09540)	comGE	2058363..2058653 (-)	291	WP_073689936.1	competence type IV pilus minor pilin ComGE	-
NYE32_RS09545 (NYE32_09545)	comYD	2058625..2059053 (-)	429	WP_253183867.1	competence type IV pilus minor pilin ComGD	Machinery gene
NYE32_RS09550 (NYE32_09550)	comYC	2059013..2059339 (-)	327	WP_070576715.1	competence type IV pilus major pilin ComGC	Machinery gene
NYE32_RS09555 (NYE32_09555)	comYB	2059336..2060436 (-)	1101	WP_142236643.1	competence type IV pilus assembly protein ComGB	Machinery gene
NYE32_RS09560 (NYE32_09560)	comYA	2060318..2061259 (-)	942	WP_002885658.1	competence type IV pilus ATPase ComGA	Machinery gene
NYE32_RS09565 (NYE32_09565)	-	2061340..2061702 (-)	363	WP_002887019.1	DUF1033 family protein	-

Sequence

Protein

• Length: 108 a.a.
• Molecular weight: 11966.05 Da
• Isoelectric Point: 9.9219

>NTDB_id=966197 NYE32_RS09550 WP_070576715.1 2059013..2059339(-) (comYC) [Streptococcus sp. FSL R7-0248]
MKMMFKKLNAVKLRAFTLIEMLVVLLIISILLLLFVPNLSKQKDSVKETGNAAVVKVVDSQAELYEMKNNKTASLAALVS
EGQITQKQADSYNDYYAKHGGESRSVAN

Nucleotide

• Length: 327 bp

>NTDB_id=966197 NYE32_RS09550 WP_070576715.1 2059013..2059339(-) (comYC) [Streptococcus sp. FSL R7-0248]
ATGAAAATGATGTTTAAAAAATTGAATGCCGTTAAACTACGAGCTTTTACGTTAATTGAAATGCTAGTCGTGCTTCTCAT
TATCAGTATTCTCCTCTTGCTTTTTGTTCCTAACTTGAGTAAGCAGAAGGATTCTGTTAAAGAGACTGGAAATGCGGCTG
TGGTCAAGGTCGTGGATTCTCAAGCAGAACTTTATGAAATGAAGAATAACAAGACAGCTAGCTTAGCAGCTCTTGTTTCA
GAAGGTCAAATCACGCAAAAACAGGCAGATTCATACAATGATTACTATGCGAAACATGGTGGCGAAAGCCGCTCAGTGGC
CAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (14-34)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus mutans UA140	69.231	96.296	0.667
comYC	Streptococcus mutans UA159	69.231	96.296	0.667
comYC	Streptococcus gordonii str. Challis substr. CH1	65.049	95.37	0.62
comGC/cglC	Streptococcus mitis SK321	62.264	98.148	0.611
comGC/cglC	Streptococcus mitis NCTC 12261	58.333	100	0.583
comGC/cglC	Streptococcus pneumoniae D39	58.491	98.148	0.574
comGC/cglC	Streptococcus pneumoniae R6	58.491	98.148	0.574
comGC/cglC	Streptococcus pneumoniae Rx1	58.491	98.148	0.574
comGC/cglC	Streptococcus pneumoniae TIGR4	58.491	98.148	0.574
comGC	Lactococcus lactis subsp. cremoris KW2	56.604	98.148	0.556
comYC	Streptococcus suis isolate S10	60.227	81.481	0.491
comGC	Staphylococcus aureus MW2	50	79.63	0.398
comGC	Staphylococcus aureus N315	50	79.63	0.398