Detailed information NTG0966196

Bioinformatically predicted

Overview

• Name: comYD
• Type: Machinery gene
• Locus tag: NYE32_RS09545
• Genome accession: NZ_CP150201
• Coordinates: 2058625..2059053 (-)
• Length: 142 a.a.
• NCBI ID: WP_253183867.1
• Uniprot ID: -
• Organism: Streptococcus sp. FSL R7-0248
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2053625..2064053

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NYE32_RS09505 (NYE32_09505)	-	2053753..2054199 (-)	447	WP_013991259.1	hypothetical protein	-
NYE32_RS09510 (NYE32_09510)	-	2054277..2054933 (-)	657	WP_064523497.1	type II CAAX endopeptidase family protein	-
NYE32_RS09515 (NYE32_09515)	-	2054945..2055142 (-)	198	WP_013991261.1	helix-turn-helix transcriptional regulator	-
NYE32_RS09520 (NYE32_09520)	-	2055393..2056586 (-)	1194	WP_073689934.1	acetate kinase	-
NYE32_RS09525 (NYE32_09525)	comYH	2056643..2057599 (-)	957	WP_073689935.1	class I SAM-dependent methyltransferase	Machinery gene
NYE32_RS09530 (NYE32_09530)	comGG	2057644..2057961 (-)	318	WP_060973072.1	competence type IV pilus minor pilin ComGG	-
NYE32_RS09535 (NYE32_09535)	comYF	2057939..2058376 (-)	438	WP_037600123.1	competence type IV pilus minor pilin ComGF	Machinery gene
NYE32_RS09540 (NYE32_09540)	comGE	2058363..2058653 (-)	291	WP_073689936.1	competence type IV pilus minor pilin ComGE	-
NYE32_RS09545 (NYE32_09545)	comYD	2058625..2059053 (-)	429	WP_253183867.1	competence type IV pilus minor pilin ComGD	Machinery gene
NYE32_RS09550 (NYE32_09550)	comYC	2059013..2059339 (-)	327	WP_070576715.1	competence type IV pilus major pilin ComGC	Machinery gene
NYE32_RS09555 (NYE32_09555)	comYB	2059336..2060436 (-)	1101	WP_142236643.1	competence type IV pilus assembly protein ComGB	Machinery gene
NYE32_RS09560 (NYE32_09560)	comYA	2060318..2061259 (-)	942	WP_002885658.1	competence type IV pilus ATPase ComGA	Machinery gene
NYE32_RS09565 (NYE32_09565)	-	2061340..2061702 (-)	363	WP_002887019.1	DUF1033 family protein	-

Sequence

Protein

• Length: 142 a.a.
• Molecular weight: 15732.22 Da
• Isoelectric Point: 10.3019

>NTDB_id=966196 NYE32_RS09545 WP_253183867.1 2058625..2059053(-) (comYD) [Streptococcus sp. FSL R7-0248]
MRNMVAKAAQWPIRAFTLLESLVTLAVVAFLTLSLSGSVTGIFQQVETNLFYLRFEYLYRDSQRLAAAEGANVELQLTKD
KISNGKSSLVIPKSIHLDKGQTLMFDAKGGNSSLTKIRFSSDKEVVTYQLNMGSGKYKKTVS

Nucleotide

• Length: 429 bp

>NTDB_id=966196 NYE32_RS09545 WP_253183867.1 2058625..2059053(-) (comYD) [Streptococcus sp. FSL R7-0248]
ATGCGAAACATGGTGGCGAAAGCCGCTCAGTGGCCAATTAGAGCCTTCACCTTGTTGGAGAGTCTGGTGACACTAGCAGT
GGTTGCCTTTCTCACTCTGAGTTTGTCAGGCTCAGTGACAGGTATTTTTCAACAGGTTGAAACTAACCTTTTTTATCTGC
GCTTTGAGTACCTATACCGAGATAGTCAGCGCTTGGCAGCGGCAGAAGGGGCCAATGTTGAATTGCAGTTGACCAAGGAT
AAAATCAGTAACGGAAAATCCAGTCTGGTGATTCCTAAAAGTATTCATCTTGATAAGGGGCAGACGCTAATGTTTGATGC
CAAAGGAGGCAACTCGAGCCTCACCAAGATTCGTTTTTCAAGTGATAAGGAGGTGGTGACCTATCAGCTTAACATGGGCA
GTGGTAAATATAAAAAGACGGTCTCTTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYD	Streptococcus mutans UA140	54.962	92.254	0.507
comYD	Streptococcus mutans UA159	54.962	92.254	0.507
comYD	Streptococcus gordonii str. Challis substr. CH1	42.143	98.592	0.415
comGD/cglD	Streptococcus pneumoniae Rx1	45.669	89.437	0.408
comGD/cglD	Streptococcus pneumoniae D39	45.669	89.437	0.408
comGD/cglD	Streptococcus pneumoniae R6	45.669	89.437	0.408
comGD/cglD	Streptococcus mitis NCTC 12261	45.669	89.437	0.408
comGD/cglD	Streptococcus mitis SK321	44.882	89.437	0.401
comGD/cglD	Streptococcus pneumoniae TIGR4	44.882	89.437	0.401
comGD	Lactococcus lactis subsp. cremoris KW2	40.909	92.958	0.38