Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | ANSO36C_RS07905 | Genome accession | NZ_AP025732 |
| Coordinates | 1797094..1798221 (+) | Length | 375 a.a. |
| NCBI ID | WP_251959078.1 | Uniprot ID | - |
| Organism | Nostoc cf. commune SO-36 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1792094..1803221
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ANSO36C_RS07895 (ANSO36C_15710) | grpE | 1793788..1794534 (-) | 747 | WP_251959076.1 | nucleotide exchange factor GrpE | - |
| ANSO36C_RS07900 (ANSO36C_15720) | pilB/pilB1 | 1794962..1796968 (+) | 2007 | WP_251959077.1 | GspE/PulE family protein | Machinery gene |
| ANSO36C_RS07905 (ANSO36C_15730) | pilT | 1797094..1798221 (+) | 1128 | WP_251959078.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| ANSO36C_RS07910 (ANSO36C_15740) | - | 1798326..1799548 (+) | 1223 | Protein_1581 | type II secretion system F family protein | - |
| ANSO36C_RS07915 (ANSO36C_15760) | - | 1799663..1800223 (+) | 561 | WP_251959079.1 | hypothetical protein | - |
| ANSO36C_RS07920 (ANSO36C_15770) | - | 1800289..1802523 (-) | 2235 | WP_251959080.1 | glycoside hydrolase | - |
| ANSO36C_RS07925 (ANSO36C_15780) | - | 1802602..1802832 (-) | 231 | WP_012408256.1 | NifU family protein | - |
Sequence
Protein
Download Length: 375 a.a. Molecular weight: 41053.28 Da Isoelectric Point: 7.4775
>NTDB_id=93817 ANSO36C_RS07905 WP_251959078.1 1797094..1798221(+) (pilT) [Nostoc cf. commune SO-36]
MEMMIEDLMEQLIELGGSDMHLSAGLPPYFRISGKLTPIGEHVLTADQCQRLIFSMLNNTQRKTLEQNWELDCSYGVKGL
ARFRVNVYKERGSYAACLRALSSKIPNFEKLGLPDIVREMTDKPRGLILVTGPTGSGKTTTLAAMIDLINRTKAEHILTV
EDPIEFVYEPIKSLVHQRQLGEDTKSFANALKAALREDPDIVLVGEMRDLETISLAISAAETGHLVFGTLHTSSAAQTVD
RIIDVFPHERQTQVRVQLSNSLVAVFSQTLVSKKNPKPGEYGRVMAQEILIVTPAISNLIREGKTSQIYSAIQTGGKLGM
QTLEKVLADFYKNGTISFEAAMSKTSKPDEIQRLIGNSTPQAAAGAKAGAAAKAH
MEMMIEDLMEQLIELGGSDMHLSAGLPPYFRISGKLTPIGEHVLTADQCQRLIFSMLNNTQRKTLEQNWELDCSYGVKGL
ARFRVNVYKERGSYAACLRALSSKIPNFEKLGLPDIVREMTDKPRGLILVTGPTGSGKTTTLAAMIDLINRTKAEHILTV
EDPIEFVYEPIKSLVHQRQLGEDTKSFANALKAALREDPDIVLVGEMRDLETISLAISAAETGHLVFGTLHTSSAAQTVD
RIIDVFPHERQTQVRVQLSNSLVAVFSQTLVSKKNPKPGEYGRVMAQEILIVTPAISNLIREGKTSQIYSAIQTGGKLGM
QTLEKVLADFYKNGTISFEAAMSKTSKPDEIQRLIGNSTPQAAAGAKAGAAAKAH
Nucleotide
Download Length: 1128 bp
>NTDB_id=93817 ANSO36C_RS07905 WP_251959078.1 1797094..1798221(+) (pilT) [Nostoc cf. commune SO-36]
ATGGAAATGATGATTGAAGACTTGATGGAGCAATTGATTGAATTGGGTGGCTCGGATATGCATTTATCCGCAGGTTTGCC
TCCCTACTTCCGTATCAGTGGCAAACTCACCCCCATCGGTGAGCATGTATTGACAGCCGATCAATGTCAAAGACTGATTT
TTAGTATGCTCAACAACACCCAGCGTAAAACCTTAGAGCAGAACTGGGAGTTGGATTGTTCTTATGGTGTTAAGGGTTTG
GCACGTTTTCGAGTCAATGTCTATAAAGAACGTGGTTCTTATGCTGCTTGCTTACGAGCATTAAGTTCTAAGATTCCTAA
CTTTGAAAAATTAGGTTTGCCAGATATCGTGCGGGAAATGACAGATAAACCCAGAGGGCTAATTCTGGTGACAGGCCCTA
CAGGTTCCGGGAAGACAACTACCCTAGCGGCAATGATTGACTTGATTAACCGCACCAAGGCAGAGCATATTTTAACGGTG
GAAGATCCAATTGAATTTGTCTACGAACCAATTAAAAGCTTGGTTCACCAAAGGCAATTGGGTGAAGATACCAAGAGTTT
TGCTAATGCTTTGAAAGCAGCTTTGCGGGAAGATCCAGATATTGTTCTGGTGGGAGAAATGCGCGATTTGGAAACAATTT
CTTTGGCGATTTCCGCAGCAGAAACAGGACACTTGGTATTTGGCACTCTCCATACCAGTTCTGCGGCACAGACAGTTGAC
CGGATTATTGACGTTTTCCCCCATGAAAGACAAACCCAGGTGCGGGTGCAGTTATCTAACTCGTTAGTGGCTGTATTTAG
CCAAACTTTGGTGTCCAAGAAAAACCCGAAACCCGGTGAATATGGTCGGGTGATGGCTCAAGAAATTCTGATTGTCACTC
CCGCTATTTCCAACTTGATTCGAGAAGGCAAAACATCTCAAATTTACTCAGCTATTCAAACGGGCGGCAAATTGGGAATG
CAAACTCTGGAGAAGGTTTTAGCTGATTTTTACAAAAATGGAACCATTTCCTTTGAAGCGGCGATGTCTAAAACTTCTAA
GCCAGATGAAATCCAGCGTCTGATTGGTAATTCTACACCGCAAGCAGCCGCAGGTGCGAAAGCTGGGGCGGCTGCCAAAG
CGCATTAA
ATGGAAATGATGATTGAAGACTTGATGGAGCAATTGATTGAATTGGGTGGCTCGGATATGCATTTATCCGCAGGTTTGCC
TCCCTACTTCCGTATCAGTGGCAAACTCACCCCCATCGGTGAGCATGTATTGACAGCCGATCAATGTCAAAGACTGATTT
TTAGTATGCTCAACAACACCCAGCGTAAAACCTTAGAGCAGAACTGGGAGTTGGATTGTTCTTATGGTGTTAAGGGTTTG
GCACGTTTTCGAGTCAATGTCTATAAAGAACGTGGTTCTTATGCTGCTTGCTTACGAGCATTAAGTTCTAAGATTCCTAA
CTTTGAAAAATTAGGTTTGCCAGATATCGTGCGGGAAATGACAGATAAACCCAGAGGGCTAATTCTGGTGACAGGCCCTA
CAGGTTCCGGGAAGACAACTACCCTAGCGGCAATGATTGACTTGATTAACCGCACCAAGGCAGAGCATATTTTAACGGTG
GAAGATCCAATTGAATTTGTCTACGAACCAATTAAAAGCTTGGTTCACCAAAGGCAATTGGGTGAAGATACCAAGAGTTT
TGCTAATGCTTTGAAAGCAGCTTTGCGGGAAGATCCAGATATTGTTCTGGTGGGAGAAATGCGCGATTTGGAAACAATTT
CTTTGGCGATTTCCGCAGCAGAAACAGGACACTTGGTATTTGGCACTCTCCATACCAGTTCTGCGGCACAGACAGTTGAC
CGGATTATTGACGTTTTCCCCCATGAAAGACAAACCCAGGTGCGGGTGCAGTTATCTAACTCGTTAGTGGCTGTATTTAG
CCAAACTTTGGTGTCCAAGAAAAACCCGAAACCCGGTGAATATGGTCGGGTGATGGCTCAAGAAATTCTGATTGTCACTC
CCGCTATTTCCAACTTGATTCGAGAAGGCAAAACATCTCAAATTTACTCAGCTATTCAAACGGGCGGCAAATTGGGAATG
CAAACTCTGGAGAAGGTTTTAGCTGATTTTTACAAAAATGGAACCATTTCCTTTGAAGCGGCGATGTCTAAAACTTCTAA
GCCAGATGAAATCCAGCGTCTGATTGGTAATTCTACACCGCAAGCAGCCGCAGGTGCGAAAGCTGGGGCGGCTGCCAAAG
CGCATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
54.467 |
92.533 |
0.504 |
| pilT | Pseudomonas stutzeri DSM 10701 |
54.179 |
92.533 |
0.501 |
| pilT | Acinetobacter baylyi ADP1 |
52.738 |
92.533 |
0.488 |
| pilT | Legionella pneumophila strain Lp02 |
52.738 |
92.533 |
0.488 |
| pilT | Legionella pneumophila strain ERS1305867 |
52.738 |
92.533 |
0.488 |
| pilT | Acinetobacter baumannii strain A118 |
51.873 |
92.533 |
0.48 |
| pilT | Acinetobacter baumannii D1279779 |
51.873 |
92.533 |
0.48 |
| pilT | Acinetobacter nosocomialis M2 |
51.873 |
92.533 |
0.48 |
| pilT | Neisseria gonorrhoeae MS11 |
50.737 |
90.4 |
0.459 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
48.169 |
94.667 |
0.456 |
| pilT | Neisseria meningitidis 8013 |
50.442 |
90.4 |
0.456 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
49.415 |
91.2 |
0.451 |
| pilT | Vibrio cholerae strain A1552 |
49.415 |
91.2 |
0.451 |