Detailed information NTG0877742

Bioinformatically predicted

Overview

• Name: comGC/cglC
• Type: Machinery gene
• Locus tag: RIM63_RS00720
• Genome accession: NZ_CP133952
• Coordinates: 127467..127790 (+)
• Length: 107 a.a.
• NCBI ID: WP_014622142.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus strain HT321
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 122467..132790

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RIM63_RS00700 (RIM63_00700)	-	122728..124731 (+)	2004	WP_317584300.1	DUF1430 domain-containing protein	-
RIM63_RS00705 (RIM63_00705)	-	124733..125380 (+)	648	WP_317584302.1	ABC transporter ATP-binding protein	-
RIM63_RS00710 (RIM63_00710)	comGA/cglA	125561..126499 (+)	939	WP_206158897.1	competence type IV pilus ATPase ComGA	Machinery gene
RIM63_RS00715 (RIM63_00715)	comYB	126432..127466 (+)	1035	WP_249093266.1	competence type IV pilus assembly protein ComGB	Machinery gene
RIM63_RS00720 (RIM63_00720)	comGC/cglC	127467..127790 (+)	324	WP_014622142.1	competence type IV pilus major pilin ComGC	Machinery gene
RIM63_RS00725 (RIM63_00725)	comGD	127768..128193 (+)	426	WP_317585222.1	competence type IV pilus minor pilin ComGD	-
RIM63_RS00730 (RIM63_00730)	comGE	128198..128440 (+)	243	WP_012677236.1	competence type IV pilus minor pilin ComGE	-
RIM63_RS00735 (RIM63_00735)	comYF	128427..128861 (+)	435	WP_012677237.1	competence type IV pilus minor pilin ComGF	Machinery gene
RIM63_RS00740 (RIM63_00740)	comGG	128839..129201 (+)	363	WP_206152302.1	competence type IV pilus minor pilin ComGG	-
RIM63_RS00745 (RIM63_00745)	comYH	129263..130216 (+)	954	WP_037580627.1	class I SAM-dependent methyltransferase	Machinery gene
RIM63_RS00750 (RIM63_00750)	-	130276..131475 (+)	1200	WP_012678817.1	acetate kinase	-
RIM63_RS00755 (RIM63_00755)	-	131844..132458 (-)	615	WP_317584310.1	hypothetical protein	-

Sequence

Protein

• Length: 107 a.a.
• Molecular weight: 12093.13 Da
• Isoelectric Point: 9.3196

>NTDB_id=877742 RIM63_RS00720 WP_014622142.1 127467..127790(+) (comGC/cglC) [Streptococcus equi subsp. zooepidemicus strain HT321]
MKMRLSTLKGQAVQAFTLLEMLLVLLIISVLMLLFVPNLSKQKDKVTDTGNAAVVKLVENQAELYELSHGEKPSLKQLQE
DGSISDKQQKAYQDYYAKHKDEAKKLN

Nucleotide

• Length: 324 bp

>NTDB_id=877742 RIM63_RS00720 WP_014622142.1 127467..127790(+) (comGC/cglC) [Streptococcus equi subsp. zooepidemicus strain HT321]
ATGAAAATGAGATTATCAACCTTAAAAGGTCAAGCTGTTCAGGCCTTCACTTTACTGGAAATGCTTCTGGTTTTGTTAAT
CATTAGTGTTTTGATGCTGTTATTTGTTCCAAATTTAAGTAAACAAAAGGATAAGGTGACAGACACAGGCAATGCTGCGG
TGGTAAAGCTGGTTGAAAATCAGGCAGAGCTTTATGAATTATCACATGGGGAAAAGCCAAGCCTGAAGCAGCTGCAAGAG
GATGGAAGTATCAGTGACAAGCAGCAAAAGGCTTATCAGGACTATTATGCAAAGCATAAAGATGAAGCTAAGAAGCTCAA
TTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (14-34)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC/cglC	Streptococcus mitis SK321	59.813	100	0.598
comGC/cglC	Streptococcus pneumoniae Rx1	57.944	100	0.579
comGC/cglC	Streptococcus pneumoniae D39	57.944	100	0.579
comGC/cglC	Streptococcus pneumoniae R6	57.944	100	0.579
comGC/cglC	Streptococcus pneumoniae TIGR4	57.944	100	0.579
comYC	Streptococcus gordonii str. Challis substr. CH1	60.396	94.393	0.57
comGC/cglC	Streptococcus mitis NCTC 12261	61.616	92.523	0.57
comYC	Streptococcus mutans UA140	58.763	90.654	0.533
comYC	Streptococcus mutans UA159	58.763	90.654	0.533
comGC	Lactococcus lactis subsp. cremoris KW2	56.842	88.785	0.505
comYC	Streptococcus suis isolate S10	60	74.766	0.449
comGC	Staphylococcus aureus MW2	50	72.897	0.364
comGC	Staphylococcus aureus N315	50	72.897	0.364