Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | RIM63_RS00745 | Genome accession | NZ_CP133952 |
| Coordinates | 129263..130216 (+) | Length | 317 a.a. |
| NCBI ID | WP_037580627.1 | Uniprot ID | A0A922NTZ6 |
| Organism | Streptococcus equi subsp. zooepidemicus strain HT321 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 124263..135216
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RIM63_RS00705 (RIM63_00705) | - | 124733..125380 (+) | 648 | WP_317584302.1 | ABC transporter ATP-binding protein | - |
| RIM63_RS00710 (RIM63_00710) | comGA/cglA | 125561..126499 (+) | 939 | WP_206158897.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| RIM63_RS00715 (RIM63_00715) | comYB | 126432..127466 (+) | 1035 | WP_249093266.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| RIM63_RS00720 (RIM63_00720) | comGC/cglC | 127467..127790 (+) | 324 | WP_014622142.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| RIM63_RS00725 (RIM63_00725) | comGD | 127768..128193 (+) | 426 | WP_317585222.1 | competence type IV pilus minor pilin ComGD | - |
| RIM63_RS00730 (RIM63_00730) | comGE | 128198..128440 (+) | 243 | WP_012677236.1 | competence type IV pilus minor pilin ComGE | - |
| RIM63_RS00735 (RIM63_00735) | comYF | 128427..128861 (+) | 435 | WP_012677237.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| RIM63_RS00740 (RIM63_00740) | comGG | 128839..129201 (+) | 363 | WP_206152302.1 | competence type IV pilus minor pilin ComGG | - |
| RIM63_RS00745 (RIM63_00745) | comYH | 129263..130216 (+) | 954 | WP_037580627.1 | class I SAM-dependent methyltransferase | Machinery gene |
| RIM63_RS00750 (RIM63_00750) | - | 130276..131475 (+) | 1200 | WP_012678817.1 | acetate kinase | - |
| RIM63_RS00755 (RIM63_00755) | - | 131844..132458 (-) | 615 | WP_317584310.1 | hypothetical protein | - |
| RIM63_RS00760 (RIM63_00760) | - | 132988..135030 (+) | 2043 | WP_317584311.1 | BglG family transcription antiterminator | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35741.74 Da Isoelectric Point: 4.8471
>NTDB_id=877744 RIM63_RS00745 WP_037580627.1 129263..130216(+) (comYH) [Streptococcus equi subsp. zooepidemicus strain HT321]
MNFEKIEQAYELILENSQLIENDLKTHIYDAIVEQNSFYLGAQGASPQVAKNIETLKALQLTKEEWRQAYQFVLIKAGKT
EPLQANHQFTPDAIGFIMLYILETLSSQESLDVLEIGSGTGNLAHTILNHSHQAIHYLGIELDDLLIDLSASIAEIMGSS
AQFIQEDAVRPQLLKESDMIISDLPVGFYPNDDIASRYQVASSDEHTYAHHLLMEQALKYLKKDGFAIFLAPVNLLSSPQ
SHLLKQWLKGYAQVAALITLPEAVFGNPANAKSIIVLCKQSNRFAETFVYPIRDLKSVDNVRDFMENFKNWKRDNVI
MNFEKIEQAYELILENSQLIENDLKTHIYDAIVEQNSFYLGAQGASPQVAKNIETLKALQLTKEEWRQAYQFVLIKAGKT
EPLQANHQFTPDAIGFIMLYILETLSSQESLDVLEIGSGTGNLAHTILNHSHQAIHYLGIELDDLLIDLSASIAEIMGSS
AQFIQEDAVRPQLLKESDMIISDLPVGFYPNDDIASRYQVASSDEHTYAHHLLMEQALKYLKKDGFAIFLAPVNLLSSPQ
SHLLKQWLKGYAQVAALITLPEAVFGNPANAKSIIVLCKQSNRFAETFVYPIRDLKSVDNVRDFMENFKNWKRDNVI
Nucleotide
Download Length: 954 bp
>NTDB_id=877744 RIM63_RS00745 WP_037580627.1 129263..130216(+) (comYH) [Streptococcus equi subsp. zooepidemicus strain HT321]
ATGAATTTTGAAAAGATTGAACAAGCCTATGAGCTTATATTAGAAAATAGCCAGCTGATTGAAAATGATCTAAAAACGCA
TATCTATGATGCTATTGTTGAGCAGAATTCTTTTTATCTGGGAGCCCAAGGAGCAAGTCCTCAGGTTGCTAAAAATATTG
AGACGTTGAAGGCCTTGCAGTTAACCAAGGAGGAGTGGCGCCAGGCTTATCAGTTTGTTTTGATCAAGGCTGGGAAAACA
GAGCCATTACAGGCCAACCACCAATTTACCCCAGACGCGATCGGCTTTATCATGCTTTATATTTTGGAGACCTTGAGCTC
ACAAGAGTCACTTGATGTGCTTGAGATTGGCAGTGGGACAGGCAATCTGGCTCACACCATTTTAAACCATTCACACCAAG
CGATTCATTATTTAGGCATTGAGCTTGATGATTTATTAATTGATCTATCAGCTAGTATTGCTGAAATCATGGGGTCGTCA
GCCCAGTTTATTCAAGAGGATGCTGTCAGACCTCAGCTGTTAAAAGAAAGTGATATGATCATTAGTGATTTGCCAGTTGG
CTTTTATCCTAACGATGATATTGCCAGCAGGTATCAGGTGGCTAGCTCAGATGAGCATACCTATGCCCATCATTTACTGA
TGGAGCAGGCCTTAAAGTACCTGAAAAAAGATGGCTTTGCTATTTTCTTAGCACCGGTAAATCTTTTGAGCAGCCCACAA
AGTCACCTCTTAAAACAATGGCTGAAGGGCTATGCTCAGGTTGCGGCCTTGATTACTTTGCCTGAGGCTGTGTTTGGAAA
TCCAGCTAATGCAAAATCGATTATTGTTCTTTGTAAGCAATCGAATCGCTTTGCAGAAACCTTTGTTTACCCCATTAGGG
ATTTGAAATCTGTTGATAATGTTCGTGATTTTATGGAAAACTTCAAAAATTGGAAACGGGATAATGTTATTTAA
ATGAATTTTGAAAAGATTGAACAAGCCTATGAGCTTATATTAGAAAATAGCCAGCTGATTGAAAATGATCTAAAAACGCA
TATCTATGATGCTATTGTTGAGCAGAATTCTTTTTATCTGGGAGCCCAAGGAGCAAGTCCTCAGGTTGCTAAAAATATTG
AGACGTTGAAGGCCTTGCAGTTAACCAAGGAGGAGTGGCGCCAGGCTTATCAGTTTGTTTTGATCAAGGCTGGGAAAACA
GAGCCATTACAGGCCAACCACCAATTTACCCCAGACGCGATCGGCTTTATCATGCTTTATATTTTGGAGACCTTGAGCTC
ACAAGAGTCACTTGATGTGCTTGAGATTGGCAGTGGGACAGGCAATCTGGCTCACACCATTTTAAACCATTCACACCAAG
CGATTCATTATTTAGGCATTGAGCTTGATGATTTATTAATTGATCTATCAGCTAGTATTGCTGAAATCATGGGGTCGTCA
GCCCAGTTTATTCAAGAGGATGCTGTCAGACCTCAGCTGTTAAAAGAAAGTGATATGATCATTAGTGATTTGCCAGTTGG
CTTTTATCCTAACGATGATATTGCCAGCAGGTATCAGGTGGCTAGCTCAGATGAGCATACCTATGCCCATCATTTACTGA
TGGAGCAGGCCTTAAAGTACCTGAAAAAAGATGGCTTTGCTATTTTCTTAGCACCGGTAAATCTTTTGAGCAGCCCACAA
AGTCACCTCTTAAAACAATGGCTGAAGGGCTATGCTCAGGTTGCGGCCTTGATTACTTTGCCTGAGGCTGTGTTTGGAAA
TCCAGCTAATGCAAAATCGATTATTGTTCTTTGTAAGCAATCGAATCGCTTTGCAGAAACCTTTGTTTACCCCATTAGGG
ATTTGAAATCTGTTGATAATGTTCGTGATTTTATGGAAAACTTCAAAAATTGGAAACGGGATAATGTTATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
62.658 |
99.685 |
0.625 |
| comYH | Streptococcus mutans UA140 |
62.658 |
99.685 |
0.625 |