Detailed information NTG0085718

Bioinformatically predicted

Overview

• Name: comX/sigX/comX2/sigX2
• Type: Regulator
• Locus tag: STYK_RS01175
• Genome accession: NZ_AP024523
• Coordinates: 232536..233015 (+)
• Length: 159 a.a.
• NCBI ID: WP_261805006.1
• Uniprot ID: -
• Organism: Streptococcus toyakuensis strain TP1632
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 227536..238015

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STYK_RS01150 (STYK_02070)	-	228276..229151 (-)	876	WP_315972278.1	RluA family pseudouridine synthase	-
STYK_RS01155 (STYK_02080)	pbp2a	229238..231433 (+)	2196	WP_261805091.1	penicillin-binding protein PBP2A	-
STYK_RS01160 (STYK_02090)	rpmG	231486..231638 (+)	153	WP_001809375.1	50S ribosomal protein L33	-
STYK_RS01165 (STYK_02100)	secE	231648..231824 (+)	177	WP_001210991.1	preprotein translocase subunit SecE	-
STYK_RS01170 (STYK_02110)	nusG	231879..232415 (+)	537	WP_000376734.1	transcription termination/antitermination protein NusG	-
STYK_RS01175 (STYK_02120)	comX/sigX/comX2/sigX2	232536..233015 (+)	480	WP_261805006.1	sigma-70 family RNA polymerase sigma factor	Regulator

Sequence

Protein

• Length: 159 a.a.
• Molecular weight: 19919.70 Da
• Isoelectric Point: 8.6070

>NTDB_id=85718 STYK_RS01175 WP_261805006.1 232536..233015(+) (comX/sigX/comX2/sigX2) [Streptococcus toyakuensis strain TP1632]
MFKELYKEVQGIVYKCRNEYYLHLWDLSDWDQEGMICLHELISREEGIVEDIPRLRKYFKTKFRNRILDYIRKQESQKRR
YDKEPYEEVGEISHRISEGGLCLDDYYLFHETLRDYRSKQSKDKQEELERVLRHERFRGRQRVLRDLRIVFKEFDIRTR

Nucleotide

• Length: 480 bp

>NTDB_id=85718 STYK_RS01175 WP_261805006.1 232536..233015(+) (comX/sigX/comX2/sigX2) [Streptococcus toyakuensis strain TP1632]
ATGTTTAAAGAATTGTATAAAGAAGTCCAGGGGATTGTATATAAGTGTAGAAATGAATATTACCTTCATTTATGGGATCT
ATCGGATTGGGACCAAGAGGGGATGATTTGCTTACATGAATTGATTAGTAGAGAAGAAGGAATAGTAGAAGACATTCCTC
GTTTAAGAAAATATTTCAAAACTAAGTTCCGTAATCGAATTCTAGACTATATCCGTAAGCAAGAAAGTCAAAAACGAAGA
TATGATAAAGAACCGTATGAAGAAGTAGGTGAGATTAGTCATCGTATCAGTGAGGGAGGTCTGTGTCTAGATGATTATTA
TCTCTTTCATGAGACACTAAGAGATTATAGAAGTAAACAAAGTAAAGACAAACAAGAAGAGTTAGAACGGGTCCTAAGAC
ATGAACGCTTCCGAGGGCGTCAAAGAGTATTAAGAGACTTACGTATTGTGTTTAAGGAGTTTGATATCCGTACTCGGTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	94.969	100	0.95
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	95.57	99.371	0.95
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	93.711	100	0.937
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	94.304	99.371	0.937
comX/comX2	Streptococcus pneumoniae R6	91.772	99.371	0.912
comX/comX1	Streptococcus pneumoniae R6	91.772	99.371	0.912
comX/comX2	Streptococcus pneumoniae D39	91.772	99.371	0.912
comX/comX2	Streptococcus pneumoniae Rx1	91.772	99.371	0.912
comX/comX1	Streptococcus pneumoniae Rx1	91.772	99.371	0.912
comX/comX1	Streptococcus pneumoniae D39	91.772	99.371	0.912
comX/comX2	Streptococcus pneumoniae TIGR4	91.139	99.371	0.906
comX/comX1	Streptococcus pneumoniae TIGR4	91.139	99.371	0.906
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	49.359	98.113	0.484
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	49.359	98.113	0.484
comX/sigX	Streptococcus suis D9	45.752	96.226	0.44
comX/sigX	Streptococcus suis isolate S10	45.752	96.226	0.44
comX/sigX	Streptococcus suis P1/7	45.752	96.226	0.44
comX/sigX	Streptococcus mutans UA159	45.098	96.226	0.434
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	40.132	95.597	0.384
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	40.132	95.597	0.384
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	40.94	93.711	0.384
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	40.94	93.711	0.384
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	40.94	93.711	0.384
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	40.94	93.711	0.384
comX	Streptococcus thermophilus LMG 18311	37.419	97.484	0.365
comX	Streptococcus thermophilus LMD-9	37.419	97.484	0.365